Protein–RNA interactions for Protein: Q6QNY0

BLOC1S3, Biogenesis of lysosome-related organelles complex 1 subunit 3, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3Q6QNY0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
BLOC1S3Q6QNY0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
BLOC1S3Q6QNY0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.4■■□□□ 1.02
BLOC1S3Q6QNY0 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
BLOC1S3Q6QNY0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
BLOC1S3Q6QNY0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.39■■□□□ 1.02
BLOC1S3Q6QNY0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.39■■□□□ 1.02
BLOC1S3Q6QNY0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
BLOC1S3Q6QNY0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BLOC1S3Q6QNY0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
BLOC1S3Q6QNY0 AC120024.1-201ENST00000562672 995 ntBASIC21.39■■□□□ 1.01
BLOC1S3Q6QNY0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BLOC1S3Q6QNY0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
BLOC1S3Q6QNY0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BLOC1S3Q6QNY0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
BLOC1S3Q6QNY0 AL353803.4-201ENST00000565882 1934 ntBASIC21.39■■□□□ 1.01
BLOC1S3Q6QNY0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.39■■□□□ 1.01
BLOC1S3Q6QNY0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BLOC1S3Q6QNY0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
BLOC1S3Q6QNY0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
BLOC1S3Q6QNY0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
BLOC1S3Q6QNY0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
BLOC1S3Q6QNY0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.38■■□□□ 1.01
BLOC1S3Q6QNY0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BLOC1S3Q6QNY0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BLOC1S3Q6QNY0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
BLOC1S3Q6QNY0 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.38■■□□□ 1.01
BLOC1S3Q6QNY0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
BLOC1S3Q6QNY0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
BLOC1S3Q6QNY0 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.37■■□□□ 1.01
BLOC1S3Q6QNY0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
BLOC1S3Q6QNY0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
BLOC1S3Q6QNY0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.37■■□□□ 1.01
BLOC1S3Q6QNY0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
BLOC1S3Q6QNY0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BLOC1S3Q6QNY0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.37■■□□□ 1.01
BLOC1S3Q6QNY0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BLOC1S3Q6QNY0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.36■■□□□ 1.01
BLOC1S3Q6QNY0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
BLOC1S3Q6QNY0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
BLOC1S3Q6QNY0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
BLOC1S3Q6QNY0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
BLOC1S3Q6QNY0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
BLOC1S3Q6QNY0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
BLOC1S3Q6QNY0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.36■■□□□ 1.01
BLOC1S3Q6QNY0 AC004448.1-201ENST00000458332 883 ntBASIC21.36■■□□□ 1.01
BLOC1S3Q6QNY0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
BLOC1S3Q6QNY0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
BLOC1S3Q6QNY0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
BLOC1S3Q6QNY0 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
BLOC1S3Q6QNY0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.36■■□□□ 1.01
BLOC1S3Q6QNY0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.36■■□□□ 1.01
BLOC1S3Q6QNY0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.36■■□□□ 1.01
BLOC1S3Q6QNY0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
BLOC1S3Q6QNY0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
BLOC1S3Q6QNY0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BLOC1S3Q6QNY0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.35■■□□□ 1.01
BLOC1S3Q6QNY0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.35■■□□□ 1.01
BLOC1S3Q6QNY0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.35■■□□□ 1.01
BLOC1S3Q6QNY0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BLOC1S3Q6QNY0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BLOC1S3Q6QNY0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
BLOC1S3Q6QNY0 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.35■■□□□ 1.01
BLOC1S3Q6QNY0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.35■■□□□ 1.01
BLOC1S3Q6QNY0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BLOC1S3Q6QNY0 AC139795.1-202ENST00000500444 432 ntBASIC21.35■■□□□ 1.01
BLOC1S3Q6QNY0 AC139530.1-201ENST00000575312 1977 ntBASIC21.35■■□□□ 1.01
BLOC1S3Q6QNY0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.35■■□□□ 1.01
BLOC1S3Q6QNY0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
BLOC1S3Q6QNY0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
BLOC1S3Q6QNY0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
BLOC1S3Q6QNY0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
BLOC1S3Q6QNY0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.34■■□□□ 1.01
BLOC1S3Q6QNY0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
BLOC1S3Q6QNY0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
BLOC1S3Q6QNY0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
BLOC1S3Q6QNY0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.34■■□□□ 1.01
BLOC1S3Q6QNY0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.34■■□□□ 1.01
BLOC1S3Q6QNY0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
BLOC1S3Q6QNY0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
BLOC1S3Q6QNY0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.34■■□□□ 1.01
BLOC1S3Q6QNY0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
BLOC1S3Q6QNY0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
BLOC1S3Q6QNY0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
BLOC1S3Q6QNY0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
BLOC1S3Q6QNY0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
BLOC1S3Q6QNY0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.33■■□□□ 1.01
BLOC1S3Q6QNY0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
BLOC1S3Q6QNY0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
BLOC1S3Q6QNY0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
BLOC1S3Q6QNY0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.33■■□□□ 1
BLOC1S3Q6QNY0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
BLOC1S3Q6QNY0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.33■■□□□ 1
BLOC1S3Q6QNY0 AC007375.3-201ENST00000600936 2314 ntBASIC21.33■■□□□ 1
BLOC1S3Q6QNY0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.33■■□□□ 1
BLOC1S3Q6QNY0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.33■■□□□ 1
BLOC1S3Q6QNY0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.33■■□□□ 1
BLOC1S3Q6QNY0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
BLOC1S3Q6QNY0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BLOC1S3Q6QNY0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms