Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.45■■□□□ 1.5
CNKSR3Q6P9H4 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.45■■□□□ 1.5
CNKSR3Q6P9H4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CNKSR3Q6P9H4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
CNKSR3Q6P9H4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CNKSR3Q6P9H4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CNKSR3Q6P9H4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
CNKSR3Q6P9H4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
CNKSR3Q6P9H4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.44■■□□□ 1.5
CNKSR3Q6P9H4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
CNKSR3Q6P9H4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CNKSR3Q6P9H4 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
CNKSR3Q6P9H4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.43■■□□□ 1.5
CNKSR3Q6P9H4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CNKSR3Q6P9H4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CNKSR3Q6P9H4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
CNKSR3Q6P9H4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CNKSR3Q6P9H4 AC091060.1-201ENST00000623524 1766 ntBASIC24.43■■□□□ 1.5
CNKSR3Q6P9H4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.43■■□□□ 1.5
CNKSR3Q6P9H4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.43■■□□□ 1.5
CNKSR3Q6P9H4 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CNKSR3Q6P9H4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CNKSR3Q6P9H4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CNKSR3Q6P9H4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CNKSR3Q6P9H4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CNKSR3Q6P9H4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
CNKSR3Q6P9H4 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CNKSR3Q6P9H4 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CNKSR3Q6P9H4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.42■■□□□ 1.5
CNKSR3Q6P9H4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC24.42■■□□□ 1.5
CNKSR3Q6P9H4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CNKSR3Q6P9H4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
CNKSR3Q6P9H4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC24.42■■□□□ 1.5
CNKSR3Q6P9H4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.42■■□□□ 1.5
CNKSR3Q6P9H4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CNKSR3Q6P9H4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.42■■□□□ 1.5
CNKSR3Q6P9H4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CNKSR3Q6P9H4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CNKSR3Q6P9H4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC24.41■■□□□ 1.5
CNKSR3Q6P9H4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CNKSR3Q6P9H4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC24.41■■□□□ 1.5
CNKSR3Q6P9H4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC24.41■■□□□ 1.5
CNKSR3Q6P9H4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CNKSR3Q6P9H4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
CNKSR3Q6P9H4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CNKSR3Q6P9H4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CNKSR3Q6P9H4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.4■■□□□ 1.5
CNKSR3Q6P9H4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CNKSR3Q6P9H4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CNKSR3Q6P9H4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CNKSR3Q6P9H4 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.4■■□□□ 1.5
CNKSR3Q6P9H4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC24.4■■□□□ 1.5
CNKSR3Q6P9H4 AP005435.1-201ENST00000529293 1178 ntBASIC24.4■■□□□ 1.5
CNKSR3Q6P9H4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.4■■□□□ 1.5
CNKSR3Q6P9H4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC24.4■■□□□ 1.5
CNKSR3Q6P9H4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CNKSR3Q6P9H4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CNKSR3Q6P9H4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
CNKSR3Q6P9H4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CNKSR3Q6P9H4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC24.39■■□□□ 1.49
CNKSR3Q6P9H4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
CNKSR3Q6P9H4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CNKSR3Q6P9H4 FP325331.1-202ENST00000623531 1380 ntBASIC24.39■■□□□ 1.49
CNKSR3Q6P9H4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CNKSR3Q6P9H4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.39■■□□□ 1.49
CNKSR3Q6P9H4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CNKSR3Q6P9H4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CNKSR3Q6P9H4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CNKSR3Q6P9H4 DUX4L4-201ENST00000566884 1269 ntBASIC24.38■■□□□ 1.49
CNKSR3Q6P9H4 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CNKSR3Q6P9H4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
CNKSR3Q6P9H4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.37■■□□□ 1.49
CNKSR3Q6P9H4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CNKSR3Q6P9H4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CNKSR3Q6P9H4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
CNKSR3Q6P9H4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CNKSR3Q6P9H4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC24.37■■□□□ 1.49
CNKSR3Q6P9H4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.37■■□□□ 1.49
CNKSR3Q6P9H4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CNKSR3Q6P9H4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.36■■□□□ 1.49
CNKSR3Q6P9H4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.36■■□□□ 1.49
CNKSR3Q6P9H4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CNKSR3Q6P9H4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC24.36■■□□□ 1.49
CNKSR3Q6P9H4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC24.36■■□□□ 1.49
CNKSR3Q6P9H4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC24.36■■□□□ 1.49
CNKSR3Q6P9H4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
CNKSR3Q6P9H4 AC105233.4-201ENST00000642045 216 ntBASIC24.36■■□□□ 1.49
CNKSR3Q6P9H4 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CNKSR3Q6P9H4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.35■■□□□ 1.49
CNKSR3Q6P9H4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
CNKSR3Q6P9H4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CNKSR3Q6P9H4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CNKSR3Q6P9H4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.35■■□□□ 1.49
CNKSR3Q6P9H4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.35■■□□□ 1.49
CNKSR3Q6P9H4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CNKSR3Q6P9H4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CNKSR3Q6P9H4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
CNKSR3Q6P9H4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CNKSR3Q6P9H4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.35■■□□□ 1.49
CNKSR3Q6P9H4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms