Protein–RNA interactions for Protein: Q6P087

RPUSD3, Mitochondrial mRNA pseudouridine synthase RPUSD3, humanhuman

Known RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3Q6P087 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPUSD3Q6P087 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPUSD3Q6P087 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPUSD3Q6P087 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RPUSD3Q6P087 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPUSD3Q6P087 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.46■□□□□ 0.87
RPUSD3Q6P087 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.46■□□□□ 0.87
RPUSD3Q6P087 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RPUSD3Q6P087 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RPUSD3Q6P087 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.46■□□□□ 0.87
RPUSD3Q6P087 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.46■□□□□ 0.87
RPUSD3Q6P087 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
RPUSD3Q6P087 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RPUSD3Q6P087 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPUSD3Q6P087 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RPUSD3Q6P087 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.45■□□□□ 0.86
RPUSD3Q6P087 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPUSD3Q6P087 YBX1P1-201ENST00000445822 960 ntBASIC20.45■□□□□ 0.86
RPUSD3Q6P087 AL358852.1-201ENST00000623174 1268 ntBASIC20.45■□□□□ 0.86
RPUSD3Q6P087 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
RPUSD3Q6P087 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.45■□□□□ 0.86
RPUSD3Q6P087 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
RPUSD3Q6P087 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.44■□□□□ 0.86
RPUSD3Q6P087 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.44■□□□□ 0.86
RPUSD3Q6P087 TSPY26P-201ENST00000476365 1326 ntBASIC20.44■□□□□ 0.86
RPUSD3Q6P087 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RPUSD3Q6P087 AC142381.3-201ENST00000568208 1670 ntBASIC20.44■□□□□ 0.86
RPUSD3Q6P087 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPUSD3Q6P087 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPUSD3Q6P087 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RPUSD3Q6P087 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.43■□□□□ 0.86
RPUSD3Q6P087 SLC47A1P1-202ENST00000449666 945 ntBASIC20.43■□□□□ 0.86
RPUSD3Q6P087 IGHV3-19-201ENST00000521488 291 ntBASIC20.43■□□□□ 0.86
RPUSD3Q6P087 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
RPUSD3Q6P087 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.43■□□□□ 0.86
RPUSD3Q6P087 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.43■□□□□ 0.86
RPUSD3Q6P087 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
RPUSD3Q6P087 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.43■□□□□ 0.86
RPUSD3Q6P087 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RPUSD3Q6P087 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.42■□□□□ 0.86
RPUSD3Q6P087 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.42■□□□□ 0.86
RPUSD3Q6P087 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.42■□□□□ 0.86
RPUSD3Q6P087 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.42■□□□□ 0.86
RPUSD3Q6P087 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RPUSD3Q6P087 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RPUSD3Q6P087 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.42■□□□□ 0.86
RPUSD3Q6P087 AC123595.1-201ENST00000440769 1046 ntBASIC20.42■□□□□ 0.86
RPUSD3Q6P087 AL499627.2-201ENST00000606283 725 ntBASIC20.42■□□□□ 0.86
RPUSD3Q6P087 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPUSD3Q6P087 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RPUSD3Q6P087 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
RPUSD3Q6P087 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
RPUSD3Q6P087 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPUSD3Q6P087 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPUSD3Q6P087 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.41■□□□□ 0.86
RPUSD3Q6P087 AC027612.3-201ENST00000413684 1047 ntBASIC20.41■□□□□ 0.86
RPUSD3Q6P087 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.41■□□□□ 0.86
RPUSD3Q6P087 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.41■□□□□ 0.86
RPUSD3Q6P087 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.41■□□□□ 0.86
RPUSD3Q6P087 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.41■□□□□ 0.86
RPUSD3Q6P087 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.41■□□□□ 0.86
RPUSD3Q6P087 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.41■□□□□ 0.86
RPUSD3Q6P087 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RPUSD3Q6P087 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RPUSD3Q6P087 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RPUSD3Q6P087 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RPUSD3Q6P087 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.41■□□□□ 0.86
RPUSD3Q6P087 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
RPUSD3Q6P087 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPUSD3Q6P087 MIR572-201ENST00000384983 95 ntBASIC20.4■□□□□ 0.86
RPUSD3Q6P087 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPUSD3Q6P087 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.4■□□□□ 0.86
RPUSD3Q6P087 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RPUSD3Q6P087 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.4■□□□□ 0.86
RPUSD3Q6P087 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.4■□□□□ 0.86
RPUSD3Q6P087 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.4■□□□□ 0.86
RPUSD3Q6P087 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.4■□□□□ 0.86
RPUSD3Q6P087 FP325331.1-202ENST00000623531 1380 ntBASIC20.4■□□□□ 0.86
RPUSD3Q6P087 AP003733.4-201ENST00000623785 1697 ntBASIC20.4■□□□□ 0.86
RPUSD3Q6P087 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RPUSD3Q6P087 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
RPUSD3Q6P087 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RPUSD3Q6P087 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.86
RPUSD3Q6P087 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RPUSD3Q6P087 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RPUSD3Q6P087 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
RPUSD3Q6P087 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPUSD3Q6P087 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPUSD3Q6P087 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.39■□□□□ 0.85
RPUSD3Q6P087 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPUSD3Q6P087 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPUSD3Q6P087 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.39■□□□□ 0.85
RPUSD3Q6P087 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPUSD3Q6P087 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RPUSD3Q6P087 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.39■□□□□ 0.85
RPUSD3Q6P087 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPUSD3Q6P087 AC022211.4-201ENST00000625094 2161 ntBASIC20.39■□□□□ 0.85
RPUSD3Q6P087 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RPUSD3Q6P087 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RPUSD3Q6P087 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms