Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FAM53AQ6NSI3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.55■□□□□ 0.56
FAM53AQ6NSI3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
FAM53AQ6NSI3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
FAM53AQ6NSI3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
FAM53AQ6NSI3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.55■□□□□ 0.56
FAM53AQ6NSI3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FAM53AQ6NSI3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FAM53AQ6NSI3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
FAM53AQ6NSI3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
FAM53AQ6NSI3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FAM53AQ6NSI3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FAM53AQ6NSI3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FAM53AQ6NSI3 BX664725.1-201ENST00000438252 379 ntBASIC18.54■□□□□ 0.56
FAM53AQ6NSI3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.54■□□□□ 0.56
FAM53AQ6NSI3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.54■□□□□ 0.56
FAM53AQ6NSI3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.54■□□□□ 0.56
FAM53AQ6NSI3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FAM53AQ6NSI3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.54■□□□□ 0.56
FAM53AQ6NSI3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
FAM53AQ6NSI3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.54■□□□□ 0.56
FAM53AQ6NSI3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FAM53AQ6NSI3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FAM53AQ6NSI3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FAM53AQ6NSI3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.53■□□□□ 0.56
FAM53AQ6NSI3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
FAM53AQ6NSI3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FAM53AQ6NSI3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FAM53AQ6NSI3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FAM53AQ6NSI3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
FAM53AQ6NSI3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.53■□□□□ 0.56
FAM53AQ6NSI3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FAM53AQ6NSI3 AC009299.2-201ENST00000482477 511 ntBASIC18.53■□□□□ 0.56
FAM53AQ6NSI3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
FAM53AQ6NSI3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.53■□□□□ 0.56
FAM53AQ6NSI3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FAM53AQ6NSI3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.53■□□□□ 0.56
FAM53AQ6NSI3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FAM53AQ6NSI3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FAM53AQ6NSI3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FAM53AQ6NSI3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FAM53AQ6NSI3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.52■□□□□ 0.56
FAM53AQ6NSI3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
FAM53AQ6NSI3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
FAM53AQ6NSI3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
FAM53AQ6NSI3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FAM53AQ6NSI3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
FAM53AQ6NSI3 AC239859.2-201ENST00000444165 318 ntBASIC18.52■□□□□ 0.56
FAM53AQ6NSI3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.52■□□□□ 0.56
FAM53AQ6NSI3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FAM53AQ6NSI3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FAM53AQ6NSI3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
FAM53AQ6NSI3 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.51■□□□□ 0.55
FAM53AQ6NSI3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.51■□□□□ 0.55
FAM53AQ6NSI3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
FAM53AQ6NSI3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FAM53AQ6NSI3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
FAM53AQ6NSI3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FAM53AQ6NSI3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FAM53AQ6NSI3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FAM53AQ6NSI3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
FAM53AQ6NSI3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FAM53AQ6NSI3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FAM53AQ6NSI3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FAM53AQ6NSI3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FAM53AQ6NSI3 AC092028.1-203ENST00000608262 953 ntBASIC18.5■□□□□ 0.55
FAM53AQ6NSI3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
FAM53AQ6NSI3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
FAM53AQ6NSI3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FAM53AQ6NSI3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.5■□□□□ 0.55
FAM53AQ6NSI3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FAM53AQ6NSI3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
FAM53AQ6NSI3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.49■□□□□ 0.55
FAM53AQ6NSI3 AL353803.4-201ENST00000565882 1934 ntBASIC18.49■□□□□ 0.55
FAM53AQ6NSI3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
FAM53AQ6NSI3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
FAM53AQ6NSI3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FAM53AQ6NSI3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FAM53AQ6NSI3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
FAM53AQ6NSI3 MIR4787-201ENST00000607364 84 ntBASIC18.49■□□□□ 0.55
FAM53AQ6NSI3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.49■□□□□ 0.55
FAM53AQ6NSI3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
FAM53AQ6NSI3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
FAM53AQ6NSI3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FAM53AQ6NSI3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
FAM53AQ6NSI3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FAM53AQ6NSI3 AC233723.2-201ENST00000623798 2106 ntBASIC18.49■□□□□ 0.55
FAM53AQ6NSI3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.49■□□□□ 0.55
FAM53AQ6NSI3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FAM53AQ6NSI3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FAM53AQ6NSI3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FAM53AQ6NSI3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.48■□□□□ 0.55
FAM53AQ6NSI3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FAM53AQ6NSI3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FAM53AQ6NSI3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
FAM53AQ6NSI3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
FAM53AQ6NSI3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FAM53AQ6NSI3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.48■□□□□ 0.55
FAM53AQ6NSI3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
FAM53AQ6NSI3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms