Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HIST2H2AA3Q6FI13 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HIST2H2AA3Q6FI13 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.6■■□□□ 1.05
HIST2H2AA3Q6FI13 MIR6724-1-201ENST00000616420 92 ntBASIC21.6■■□□□ 1.05
HIST2H2AA3Q6FI13 MIR6724-2-201ENST00000616483 92 ntBASIC21.6■■□□□ 1.05
HIST2H2AA3Q6FI13 MIR6724-4-201ENST00000617390 92 ntBASIC21.6■■□□□ 1.05
HIST2H2AA3Q6FI13 MIR6724-3-201ENST00000622482 92 ntBASIC21.6■■□□□ 1.05
HIST2H2AA3Q6FI13 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.6■■□□□ 1.05
HIST2H2AA3Q6FI13 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HIST2H2AA3Q6FI13 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
HIST2H2AA3Q6FI13 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
HIST2H2AA3Q6FI13 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HIST2H2AA3Q6FI13 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HIST2H2AA3Q6FI13 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HIST2H2AA3Q6FI13 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HIST2H2AA3Q6FI13 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HIST2H2AA3Q6FI13 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HIST2H2AA3Q6FI13 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
HIST2H2AA3Q6FI13 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HIST2H2AA3Q6FI13 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
HIST2H2AA3Q6FI13 KRT16P3-201ENST00000439127 1283 ntBASIC21.59■■□□□ 1.05
HIST2H2AA3Q6FI13 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
HIST2H2AA3Q6FI13 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.59■■□□□ 1.05
HIST2H2AA3Q6FI13 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HIST2H2AA3Q6FI13 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HIST2H2AA3Q6FI13 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
HIST2H2AA3Q6FI13 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
HIST2H2AA3Q6FI13 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HIST2H2AA3Q6FI13 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.58■■□□□ 1.05
HIST2H2AA3Q6FI13 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.58■■□□□ 1.05
HIST2H2AA3Q6FI13 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.58■■□□□ 1.04
HIST2H2AA3Q6FI13 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
HIST2H2AA3Q6FI13 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.58■■□□□ 1.04
HIST2H2AA3Q6FI13 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
HIST2H2AA3Q6FI13 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.58■■□□□ 1.04
HIST2H2AA3Q6FI13 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HIST2H2AA3Q6FI13 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
HIST2H2AA3Q6FI13 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.57■■□□□ 1.04
HIST2H2AA3Q6FI13 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.57■■□□□ 1.04
HIST2H2AA3Q6FI13 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.57■■□□□ 1.04
HIST2H2AA3Q6FI13 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
HIST2H2AA3Q6FI13 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HIST2H2AA3Q6FI13 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.57■■□□□ 1.04
HIST2H2AA3Q6FI13 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HIST2H2AA3Q6FI13 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.57■■□□□ 1.04
HIST2H2AA3Q6FI13 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HIST2H2AA3Q6FI13 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
HIST2H2AA3Q6FI13 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HIST2H2AA3Q6FI13 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.56■■□□□ 1.04
HIST2H2AA3Q6FI13 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HIST2H2AA3Q6FI13 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
HIST2H2AA3Q6FI13 AC144652.1-201ENST00000609974 1624 ntBASIC21.56■■□□□ 1.04
HIST2H2AA3Q6FI13 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.56■■□□□ 1.04
HIST2H2AA3Q6FI13 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HIST2H2AA3Q6FI13 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HIST2H2AA3Q6FI13 GUSBP5-201ENST00000418136 578 ntBASIC21.55■■□□□ 1.04
HIST2H2AA3Q6FI13 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.55■■□□□ 1.04
HIST2H2AA3Q6FI13 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
HIST2H2AA3Q6FI13 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HIST2H2AA3Q6FI13 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HIST2H2AA3Q6FI13 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HIST2H2AA3Q6FI13 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
HIST2H2AA3Q6FI13 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.55■■□□□ 1.04
HIST2H2AA3Q6FI13 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HIST2H2AA3Q6FI13 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HIST2H2AA3Q6FI13 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.55■■□□□ 1.04
HIST2H2AA3Q6FI13 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HIST2H2AA3Q6FI13 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HIST2H2AA3Q6FI13 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
HIST2H2AA3Q6FI13 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.54■■□□□ 1.04
HIST2H2AA3Q6FI13 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
HIST2H2AA3Q6FI13 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.54■■□□□ 1.04
HIST2H2AA3Q6FI13 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
HIST2H2AA3Q6FI13 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
HIST2H2AA3Q6FI13 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
HIST2H2AA3Q6FI13 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HIST2H2AA3Q6FI13 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.53■■□□□ 1.04
HIST2H2AA3Q6FI13 AL353803.4-201ENST00000565882 1934 ntBASIC21.53■■□□□ 1.04
HIST2H2AA3Q6FI13 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HIST2H2AA3Q6FI13 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.53■■□□□ 1.04
HIST2H2AA3Q6FI13 FP325331.1-202ENST00000623531 1380 ntBASIC21.53■■□□□ 1.04
HIST2H2AA3Q6FI13 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HIST2H2AA3Q6FI13 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
HIST2H2AA3Q6FI13 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HIST2H2AA3Q6FI13 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HIST2H2AA3Q6FI13 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.53■■□□□ 1.04
HIST2H2AA3Q6FI13 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HIST2H2AA3Q6FI13 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HIST2H2AA3Q6FI13 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
HIST2H2AA3Q6FI13 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.52■■□□□ 1.04
HIST2H2AA3Q6FI13 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.52■■□□□ 1.04
HIST2H2AA3Q6FI13 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
HIST2H2AA3Q6FI13 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.04
HIST2H2AA3Q6FI13 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.52■■□□□ 1.04
HIST2H2AA3Q6FI13 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.52■■□□□ 1.04
HIST2H2AA3Q6FI13 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.52■■□□□ 1.04
HIST2H2AA3Q6FI13 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
HIST2H2AA3Q6FI13 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
HIST2H2AA3Q6FI13 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
HIST2H2AA3Q6FI13 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms