Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
LPCAT4Q643R3 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LPCAT4Q643R3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.12■□□□□ 0.97
LPCAT4Q643R3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LPCAT4Q643R3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
LPCAT4Q643R3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
LPCAT4Q643R3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LPCAT4Q643R3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LPCAT4Q643R3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LPCAT4Q643R3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LPCAT4Q643R3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LPCAT4Q643R3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LPCAT4Q643R3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.11■□□□□ 0.97
LPCAT4Q643R3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LPCAT4Q643R3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
LPCAT4Q643R3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LPCAT4Q643R3 AC092667.1-201ENST00000434301 2586 ntBASIC21.11■□□□□ 0.97
LPCAT4Q643R3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.11■□□□□ 0.97
LPCAT4Q643R3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
LPCAT4Q643R3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.1■□□□□ 0.97
LPCAT4Q643R3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
LPCAT4Q643R3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LPCAT4Q643R3 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.1■□□□□ 0.97
LPCAT4Q643R3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LPCAT4Q643R3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.1■□□□□ 0.97
LPCAT4Q643R3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
LPCAT4Q643R3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
LPCAT4Q643R3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LPCAT4Q643R3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
LPCAT4Q643R3 AC080038.3-201ENST00000623346 1952 ntBASIC21.1■□□□□ 0.97
LPCAT4Q643R3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
LPCAT4Q643R3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.1■□□□□ 0.97
LPCAT4Q643R3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
LPCAT4Q643R3 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LPCAT4Q643R3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LPCAT4Q643R3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LPCAT4Q643R3 AC005229.4-201ENST00000610085 2198 ntBASIC21.09■□□□□ 0.97
LPCAT4Q643R3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LPCAT4Q643R3 AC025884.2-201ENST00000553429 711 ntBASIC21.09■□□□□ 0.97
LPCAT4Q643R3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.09■□□□□ 0.97
LPCAT4Q643R3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LPCAT4Q643R3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LPCAT4Q643R3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LPCAT4Q643R3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LPCAT4Q643R3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LPCAT4Q643R3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
LPCAT4Q643R3 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
LPCAT4Q643R3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LPCAT4Q643R3 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LPCAT4Q643R3 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LPCAT4Q643R3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.08■□□□□ 0.97
LPCAT4Q643R3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LPCAT4Q643R3 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.08■□□□□ 0.97
LPCAT4Q643R3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.08■□□□□ 0.97
LPCAT4Q643R3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LPCAT4Q643R3 MIR3960-201ENST00000583311 91 ntBASIC21.08■□□□□ 0.97
LPCAT4Q643R3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
LPCAT4Q643R3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LPCAT4Q643R3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.08■□□□□ 0.96
LPCAT4Q643R3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
LPCAT4Q643R3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LPCAT4Q643R3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LPCAT4Q643R3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LPCAT4Q643R3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
LPCAT4Q643R3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LPCAT4Q643R3 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.07■□□□□ 0.96
LPCAT4Q643R3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.07■□□□□ 0.96
LPCAT4Q643R3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
LPCAT4Q643R3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LPCAT4Q643R3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.07■□□□□ 0.96
LPCAT4Q643R3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.07■□□□□ 0.96
LPCAT4Q643R3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
LPCAT4Q643R3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
LPCAT4Q643R3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LPCAT4Q643R3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
LPCAT4Q643R3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LPCAT4Q643R3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LPCAT4Q643R3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LPCAT4Q643R3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LPCAT4Q643R3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.06■□□□□ 0.96
LPCAT4Q643R3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LPCAT4Q643R3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LPCAT4Q643R3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.06■□□□□ 0.96
LPCAT4Q643R3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
LPCAT4Q643R3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LPCAT4Q643R3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LPCAT4Q643R3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
LPCAT4Q643R3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LPCAT4Q643R3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LPCAT4Q643R3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LPCAT4Q643R3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LPCAT4Q643R3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LPCAT4Q643R3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LPCAT4Q643R3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LPCAT4Q643R3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LPCAT4Q643R3 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LPCAT4Q643R3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LPCAT4Q643R3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LPCAT4Q643R3 FAM99A-202ENST00000538190 1989 ntBASIC21.05■□□□□ 0.96
LPCAT4Q643R3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms