Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SGO1Q5FBB7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.7■■□□□ 1.06
SGO1Q5FBB7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.7■■□□□ 1.06
SGO1Q5FBB7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.7■■□□□ 1.06
SGO1Q5FBB7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SGO1Q5FBB7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SGO1Q5FBB7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SGO1Q5FBB7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SGO1Q5FBB7 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
SGO1Q5FBB7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SGO1Q5FBB7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SGO1Q5FBB7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SGO1Q5FBB7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.69■■□□□ 1.06
SGO1Q5FBB7 BX664725.1-201ENST00000438252 379 ntBASIC21.69■■□□□ 1.06
SGO1Q5FBB7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.69■■□□□ 1.06
SGO1Q5FBB7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SGO1Q5FBB7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.69■■□□□ 1.06
SGO1Q5FBB7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SGO1Q5FBB7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SGO1Q5FBB7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SGO1Q5FBB7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
SGO1Q5FBB7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SGO1Q5FBB7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
SGO1Q5FBB7 RARRES2P1-201ENST00000474487 481 ntBASIC21.68■■□□□ 1.06
SGO1Q5FBB7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.68■■□□□ 1.06
SGO1Q5FBB7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.68■■□□□ 1.06
SGO1Q5FBB7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SGO1Q5FBB7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.68■■□□□ 1.06
SGO1Q5FBB7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SGO1Q5FBB7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SGO1Q5FBB7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.68■■□□□ 1.06
SGO1Q5FBB7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SGO1Q5FBB7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SGO1Q5FBB7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SGO1Q5FBB7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SGO1Q5FBB7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.67■■□□□ 1.06
SGO1Q5FBB7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SGO1Q5FBB7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SGO1Q5FBB7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.67■■□□□ 1.06
SGO1Q5FBB7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SGO1Q5FBB7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SGO1Q5FBB7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SGO1Q5FBB7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SGO1Q5FBB7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SGO1Q5FBB7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SGO1Q5FBB7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.67■■□□□ 1.06
SGO1Q5FBB7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SGO1Q5FBB7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SGO1Q5FBB7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SGO1Q5FBB7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.66■■□□□ 1.06
SGO1Q5FBB7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.66■■□□□ 1.06
SGO1Q5FBB7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SGO1Q5FBB7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
SGO1Q5FBB7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.66■■□□□ 1.06
SGO1Q5FBB7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SGO1Q5FBB7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.65■■□□□ 1.06
SGO1Q5FBB7 AC021242.3-201ENST00000607598 1377 ntBASIC21.65■■□□□ 1.06
SGO1Q5FBB7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SGO1Q5FBB7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SGO1Q5FBB7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SGO1Q5FBB7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SGO1Q5FBB7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.65■■□□□ 1.06
SGO1Q5FBB7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SGO1Q5FBB7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SGO1Q5FBB7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SGO1Q5FBB7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
SGO1Q5FBB7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.06
SGO1Q5FBB7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
SGO1Q5FBB7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SGO1Q5FBB7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SGO1Q5FBB7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.64■■□□□ 1.05
SGO1Q5FBB7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
SGO1Q5FBB7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.64■■□□□ 1.05
SGO1Q5FBB7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SGO1Q5FBB7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.64■■□□□ 1.05
SGO1Q5FBB7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SGO1Q5FBB7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.64■■□□□ 1.05
SGO1Q5FBB7 AC233723.2-201ENST00000623798 2106 ntBASIC21.64■■□□□ 1.05
SGO1Q5FBB7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.64■■□□□ 1.05
SGO1Q5FBB7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.64■■□□□ 1.05
SGO1Q5FBB7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SGO1Q5FBB7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.63■■□□□ 1.05
SGO1Q5FBB7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SGO1Q5FBB7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SGO1Q5FBB7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SGO1Q5FBB7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.63■■□□□ 1.05
SGO1Q5FBB7 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SGO1Q5FBB7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SGO1Q5FBB7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SGO1Q5FBB7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SGO1Q5FBB7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SGO1Q5FBB7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SGO1Q5FBB7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.63■■□□□ 1.05
SGO1Q5FBB7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SGO1Q5FBB7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SGO1Q5FBB7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
SGO1Q5FBB7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SGO1Q5FBB7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.62■■□□□ 1.05
SGO1Q5FBB7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SGO1Q5FBB7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms