Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
USH1GQ495M9 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
USH1GQ495M9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.81■■□□□ 1.72
USH1GQ495M9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
USH1GQ495M9 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
USH1GQ495M9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.81■■□□□ 1.72
USH1GQ495M9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.81■■□□□ 1.72
USH1GQ495M9 AC105265.2-201ENST00000467189 838 ntBASIC25.81■■□□□ 1.72
USH1GQ495M9 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
USH1GQ495M9 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.81■■□□□ 1.72
USH1GQ495M9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.81■■□□□ 1.72
USH1GQ495M9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
USH1GQ495M9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
USH1GQ495M9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
USH1GQ495M9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
USH1GQ495M9 AC091305.1-201ENST00000479476 895 ntBASIC25.8■■□□□ 1.72
USH1GQ495M9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC25.8■■□□□ 1.72
USH1GQ495M9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
USH1GQ495M9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
USH1GQ495M9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
USH1GQ495M9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
USH1GQ495M9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
USH1GQ495M9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
USH1GQ495M9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.79■■□□□ 1.72
USH1GQ495M9 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
USH1GQ495M9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
USH1GQ495M9 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
USH1GQ495M9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
USH1GQ495M9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.78■■□□□ 1.72
USH1GQ495M9 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
USH1GQ495M9 AC027682.1-201ENST00000562846 899 ntBASIC25.78■■□□□ 1.72
USH1GQ495M9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
USH1GQ495M9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
USH1GQ495M9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.78■■□□□ 1.72
USH1GQ495M9 AC144652.1-201ENST00000609974 1624 ntBASIC25.77■■□□□ 1.72
USH1GQ495M9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.77■■□□□ 1.72
USH1GQ495M9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
USH1GQ495M9 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
USH1GQ495M9 AC099791.1-201ENST00000416440 715 ntBASIC25.77■■□□□ 1.72
USH1GQ495M9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.77■■□□□ 1.72
USH1GQ495M9 CA15P2-201ENST00000611168 834 ntBASIC25.77■■□□□ 1.72
USH1GQ495M9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
USH1GQ495M9 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.72
USH1GQ495M9 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
USH1GQ495M9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
USH1GQ495M9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.76■■□□□ 1.71
USH1GQ495M9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
USH1GQ495M9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.76■■□□□ 1.71
USH1GQ495M9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.76■■□□□ 1.71
USH1GQ495M9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.76■■□□□ 1.71
USH1GQ495M9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
USH1GQ495M9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
USH1GQ495M9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
USH1GQ495M9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
USH1GQ495M9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
USH1GQ495M9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
USH1GQ495M9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
USH1GQ495M9 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.75■■□□□ 1.71
USH1GQ495M9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
USH1GQ495M9 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.75■■□□□ 1.71
USH1GQ495M9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
USH1GQ495M9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
USH1GQ495M9 RASA4CP-201ENST00000424092 1398 ntBASIC25.75■■□□□ 1.71
USH1GQ495M9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
USH1GQ495M9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
USH1GQ495M9 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
USH1GQ495M9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
USH1GQ495M9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.75■■□□□ 1.71
USH1GQ495M9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC25.75■■□□□ 1.71
USH1GQ495M9 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
USH1GQ495M9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
USH1GQ495M9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
USH1GQ495M9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
USH1GQ495M9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC25.74■■□□□ 1.71
USH1GQ495M9 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
USH1GQ495M9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.74■■□□□ 1.71
USH1GQ495M9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.73■■□□□ 1.71
USH1GQ495M9 FP325331.1-202ENST00000623531 1380 ntBASIC25.73■■□□□ 1.71
USH1GQ495M9 AC079630.1-202ENST00000618127 1840 ntBASIC25.73■■□□□ 1.71
USH1GQ495M9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
USH1GQ495M9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
USH1GQ495M9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.73■■□□□ 1.71
USH1GQ495M9 LINC01529-204ENST00000636474 1715 ntBASIC25.73■■□□□ 1.71
USH1GQ495M9 AC133637.1-201ENST00000624115 1537 ntBASIC25.73■■□□□ 1.71
USH1GQ495M9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
USH1GQ495M9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC25.72■■□□□ 1.71
USH1GQ495M9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.72■■□□□ 1.71
USH1GQ495M9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
USH1GQ495M9 DUX4L4-201ENST00000566884 1269 ntBASIC25.72■■□□□ 1.71
USH1GQ495M9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC25.72■■□□□ 1.71
USH1GQ495M9 AC233992.3-201ENST00000607491 485 ntBASIC25.72■■□□□ 1.71
USH1GQ495M9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
USH1GQ495M9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC25.72■■□□□ 1.71
USH1GQ495M9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC25.72■■□□□ 1.71
USH1GQ495M9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.71■■□□□ 1.71
USH1GQ495M9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.71■■□□□ 1.71
USH1GQ495M9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
USH1GQ495M9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
USH1GQ495M9 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
USH1GQ495M9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms