Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 snR3snR3 194 nt4.07□□□□□ -1.76
RRP40Q08285 MNN4YKL201C 3537 nt4.07□□□□□ -1.76
RRP40Q08285 SEN1YLR430W 6696 nt4.06□□□□□ -1.76
RRP40Q08285 PRM7YDL039C 2097 nt4.06□□□□□ -1.76
RRP40Q08285 SMP1YBR182C 1359 nt4.06□□□□□ -1.76
RRP40Q08285 RPN5YDL147W 1338 nt4.06□□□□□ -1.76
RRP40Q08285 PSY4YBL046W 1326 nt4.06□□□□□ -1.76
RRP40Q08285 RAM1YDL090C 1296 nt4.06□□□□□ -1.76
RRP40Q08285 YER133W-AYER133W-A 342 nt4.06□□□□□ -1.76
RRP40Q08285 LOH1YJL038C 660 nt4.06□□□□□ -1.76
RRP40Q08285 FMP46YKR049C 402 nt4.06□□□□□ -1.76
RRP40Q08285 DCS2YOR173W 1062 nt4.06□□□□□ -1.76
RRP40Q08285 RER1YCL001W 567 nt4.06□□□□□ -1.76
RRP40Q08285 HIS4YCL030C 2400 nt4.06□□□□□ -1.76
RRP40Q08285 GCR1YPL075W 2358 nt4.06□□□□□ -1.76
RRP40Q08285 VAC7YNL054W 3498 nt4.05□□□□□ -1.76
RRP40Q08285 YHR177WYHR177W 1362 nt4.05□□□□□ -1.76
RRP40Q08285 FOX2YKR009C 2703 nt4.05□□□□□ -1.76
RRP40Q08285 UBC6YER100W 753 nt4.05□□□□□ -1.76
RRP40Q08285 ARC1YGL105W 1131 nt4.05□□□□□ -1.76
RRP40Q08285 FMP48YGR052W 1110 nt4.05□□□□□ -1.76
RRP40Q08285 MAD2YJL030W 591 nt4.05□□□□□ -1.76
RRP40Q08285 LAP2YNL045W 2016 nt4.05□□□□□ -1.76
RRP40Q08285 MET4YNL103W 2019 nt4.05□□□□□ -1.76
RRP40Q08285 TOG1YER184C 2385 nt4.05□□□□□ -1.76
RRP40Q08285 EGT2YNL327W 3126 nt4.05□□□□□ -1.76
RRP40Q08285 RAD52YML032C 1416 nt4.04□□□□□ -1.76
RRP40Q08285 GDH2YDL215C 3279 nt4.04□□□□□ -1.76
RRP40Q08285 BUD13YGL174W 801 nt4.04□□□□□ -1.76
RRP40Q08285 YGR291CYGR291C 222 nt4.04□□□□□ -1.76
RRP40Q08285 RPL8AYHL033C 771 nt4.04□□□□□ -1.76
RRP40Q08285 YMR086C-AYMR086C-A 339 nt4.04□□□□□ -1.76
RRP40Q08285 YMR315WYMR315W 1050 nt4.04□□□□□ -1.76
RRP40Q08285 YBR298C-AYBR298C-A 222 nt4.04□□□□□ -1.76
RRP40Q08285 STB3YDR169C 1542 nt4.04□□□□□ -1.76
RRP40Q08285 UPC2YDR213W 2742 nt4.03□□□□□ -1.76
RRP40Q08285 SUL2YLR092W 2682 nt4.03□□□□□ -1.76
RRP40Q08285 WTM1YOR230W 1314 nt4.03□□□□□ -1.76
RRP40Q08285 XKS1YGR194C 1803 nt4.03□□□□□ -1.76
RRP40Q08285 SNM1YDR478W 597 nt4.03□□□□□ -1.76
RRP40Q08285 ISA1YLL027W 753 nt4.03□□□□□ -1.76
RRP40Q08285 CDC42YLR229C 576 nt4.03□□□□□ -1.76
RRP40Q08285 YLR407WYLR407W 687 nt4.03□□□□□ -1.76
RRP40Q08285 SUA7YPR086W 1038 nt4.03□□□□□ -1.76
RRP40Q08285 ADP1YCR011C 3150 nt4.03□□□□□ -1.76
RRP40Q08285 IFM1YOL023W 2031 nt4.02□□□□□ -1.77
RRP40Q08285 HUL4YJR036C 2679 nt4.02□□□□□ -1.77
RRP40Q08285 YBR139WYBR139W 1527 nt4.02□□□□□ -1.77
RRP40Q08285 ADY3YDL239C 2373 nt4.02□□□□□ -1.77
RRP40Q08285 YLR152CYLR152C 1731 nt4.02□□□□□ -1.77
RRP40Q08285 YIL021C-AYIL021C-A 270 nt4.02□□□□□ -1.77
RRP40Q08285 YIL171WYIL171W 330 nt4.02□□□□□ -1.77
RRP40Q08285 YML031C-AYML031C-A 336 nt4.02□□□□□ -1.77
RRP40Q08285 YMR082CYMR082C 357 nt4.02□□□□□ -1.77
RRP40Q08285 VPS68YOL129W 555 nt4.02□□□□□ -1.77
RRP40Q08285 YPL077CYPL077C 723 nt4.02□□□□□ -1.77
RRP40Q08285 TRE1YPL176C 2352 nt4.02□□□□□ -1.77
RRP40Q08285 IXR1YKL032C 1794 nt4.02□□□□□ -1.77
RRP40Q08285 FRT2YAL028W 1587 nt4.02□□□□□ -1.77
RRP40Q08285 TDA11YHR159W 1515 nt4.01□□□□□ -1.77
RRP40Q08285 GSH2YOL049W 1476 nt4.01□□□□□ -1.77
RRP40Q08285 YDR056CYDR056C 618 nt4.01□□□□□ -1.77
RRP40Q08285 TAF10YDR167W 621 nt4.01□□□□□ -1.77
RRP40Q08285 BNA6YFR047C 888 nt4.01□□□□□ -1.77
RRP40Q08285 SKG1YKR100C 1068 nt4.01□□□□□ -1.77
RRP40Q08285 MAP1YLR244C 1164 nt4.01□□□□□ -1.77
RRP40Q08285 YBL010CYBL010C 843 nt4.01□□□□□ -1.77
RRP40Q08285 OM14YBR230C 405 nt4.01□□□□□ -1.77
RRP40Q08285 NUG1YER006W 1563 nt4.01□□□□□ -1.77
RRP40Q08285 RAD57YDR004W 1383 nt4.01□□□□□ -1.77
RRP40Q08285 BRE4YDL231C 3378 nt4□□□□□ -1.77
RRP40Q08285 PDR5YOR153W 4536 nt4□□□□□ -1.77
RRP40Q08285 IBA57YJR122W 1494 nt4□□□□□ -1.77
RRP40Q08285 PEP5YMR231W 3090 nt4□□□□□ -1.77
RRP40Q08285 YGR011WYGR011W 327 nt4□□□□□ -1.77
RRP40Q08285 tQ(UUG)CtQ(UUG)C 72 nt4□□□□□ -1.77
RRP40Q08285 tQ(UUG)D1tQ(UUG)D1 72 nt4□□□□□ -1.77
RRP40Q08285 tQ(UUG)D2tQ(UUG)D2 72 nt4□□□□□ -1.77
RRP40Q08285 tQ(UUG)D3tQ(UUG)D3 72 nt4□□□□□ -1.77
RRP40Q08285 tQ(UUG)E1tQ(UUG)E1 72 nt4□□□□□ -1.77
RRP40Q08285 tQ(UUG)HtQ(UUG)H 72 nt4□□□□□ -1.77
RRP40Q08285 tQ(UUG)LtQ(UUG)L 72 nt4□□□□□ -1.77
RRP40Q08285 YLR157W-DYLR157W-D 213 nt4□□□□□ -1.77
RRP40Q08285 YOL035CYOL035C 303 nt4□□□□□ -1.77
RRP40Q08285 ARG4YHR018C 1392 nt4□□□□□ -1.77
RRP40Q08285 PMT5YDL093W 2232 nt3.99□□□□□ -1.77
RRP40Q08285 TRS85YDR108W 2097 nt3.99□□□□□ -1.77
RRP40Q08285 HOS3YPL116W 2094 nt3.99□□□□□ -1.77
RRP40Q08285 LDB17YDL146W 1476 nt3.99□□□□□ -1.77
RRP40Q08285 YSH1YLR277C 2340 nt3.99□□□□□ -1.77
RRP40Q08285 RPC53YDL150W 1269 nt3.99□□□□□ -1.77
RRP40Q08285 COX18YGR062C 951 nt3.99□□□□□ -1.77
RRP40Q08285 NVJ1YHR195W 966 nt3.99□□□□□ -1.77
RRP40Q08285 NCE102YPR149W 522 nt3.99□□□□□ -1.77
RRP40Q08285 YBR196C-BYBR196C-B 105 nt3.99□□□□□ -1.77
RRP40Q08285 HOYDL227C 1761 nt3.99□□□□□ -1.77
RRP40Q08285 ATP5YDR298C 639 nt3.98□□□□□ -1.77
RRP40Q08285 API2YDR525W 330 nt3.98□□□□□ -1.77
RRP40Q08285 YLR125WYLR125W 411 nt3.98□□□□□ -1.77
RRP40Q08285 RPG1YBR079C 2895 nt3.97□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 16 ms