Protein–RNA interactions for Protein: Q06696

VPS36, Vacuolar protein-sorting-associated protein 36, yeastyeast

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS36Q06696 NQM1YGR043C 1002 nt5.06□□□□□ -1.6
VPS36Q06696 CUP1-1YHR053C 186 nt5.06□□□□□ -1.6
VPS36Q06696 CUP1-2YHR055C 186 nt5.06□□□□□ -1.6
VPS36Q06696 LST8YNL006W 912 nt5.06□□□□□ -1.6
VPS36Q06696 MED7YOL135C 669 nt5.06□□□□□ -1.6
VPS36Q06696 MUM2YBR057C 1101 nt5.06□□□□□ -1.6
VPS36Q06696 RAT1YOR048C 3021 nt5.05□□□□□ -1.6
VPS36Q06696 TYR1YBR166C 1359 nt5.05□□□□□ -1.6
VPS36Q06696 CBS2YDR197W 1170 nt5.05□□□□□ -1.6
VPS36Q06696 PEX14YGL153W 1026 nt5.05□□□□□ -1.6
VPS36Q06696 CDC43YGL155W 1131 nt5.05□□□□□ -1.6
VPS36Q06696 CSM3YMR048W 954 nt5.05□□□□□ -1.6
VPS36Q06696 YNL171CYNL171C 369 nt5.05□□□□□ -1.6
VPS36Q06696 MDJ2YNL328C 441 nt5.05□□□□□ -1.6
VPS36Q06696 AIM39YOL053W 1188 nt5.05□□□□□ -1.6
VPS36Q06696 ARR3YPR201W 1215 nt5.05□□□□□ -1.6
VPS36Q06696 TRM1YDR120C 1713 nt5.05□□□□□ -1.6
VPS36Q06696 MEC3YLR288C 1425 nt5.05□□□□□ -1.6
VPS36Q06696 TRM13YOL125W 1431 nt5.05□□□□□ -1.6
VPS36Q06696 DBP5YOR046C 1449 nt5.05□□□□□ -1.6
VPS36Q06696 NUP116YMR047C 3342 nt5.04□□□□□ -1.6
VPS36Q06696 GLO2YDR272W 825 nt5.04□□□□□ -1.6
VPS36Q06696 tN(GUU)CtN(GUU)C 74 nt5.04□□□□□ -1.6
VPS36Q06696 tN(GUU)FtN(GUU)F 74 nt5.04□□□□□ -1.6
VPS36Q06696 tN(GUU)GtN(GUU)G 74 nt5.04□□□□□ -1.6
VPS36Q06696 tN(GUU)KtN(GUU)K 74 nt5.04□□□□□ -1.6
VPS36Q06696 tN(GUU)LtN(GUU)L 74 nt5.04□□□□□ -1.6
VPS36Q06696 tN(GUU)N1tN(GUU)N1 74 nt5.04□□□□□ -1.6
VPS36Q06696 tN(GUU)N2tN(GUU)N2 74 nt5.04□□□□□ -1.6
VPS36Q06696 tN(GUU)O1tN(GUU)O1 74 nt5.04□□□□□ -1.6
VPS36Q06696 tN(GUU)O2tN(GUU)O2 74 nt5.04□□□□□ -1.6
VPS36Q06696 tN(GUU)PtN(GUU)P 74 nt5.04□□□□□ -1.6
VPS36Q06696 TTI2YJR136C 1266 nt5.04□□□□□ -1.6
VPS36Q06696 SEC13YLR208W 894 nt5.04□□□□□ -1.6
VPS36Q06696 GAB1YLR459W 1185 nt5.04□□□□□ -1.6
VPS36Q06696 PIN2YOR104W 849 nt5.04□□□□□ -1.6
VPS36Q06696 PNT1YOR266W 1272 nt5.04□□□□□ -1.6
VPS36Q06696 SFG1YOR315W 1041 nt5.04□□□□□ -1.6
VPS36Q06696 UBC4YBR082C 447 nt5.04□□□□□ -1.6
VPS36Q06696 MPH2YDL247W 1830 nt5.04□□□□□ -1.6
VPS36Q06696 SAD1YFR005C 1347 nt5.03□□□□□ -1.6
VPS36Q06696 YGR125WYGR125W 3111 nt5.03□□□□□ -1.6
VPS36Q06696 APM2YHL019C 1818 nt5.03□□□□□ -1.6
VPS36Q06696 YCR015CYCR015C 954 nt5.03□□□□□ -1.6
VPS36Q06696 COX26YDR119W-A 201 nt5.03□□□□□ -1.6
VPS36Q06696 SEN34YAR008W 828 nt5.03□□□□□ -1.6
VPS36Q06696 MVD1YNR043W 1191 nt5.03□□□□□ -1.6
VPS36Q06696 AIF1YNR074C 1137 nt5.03□□□□□ -1.6
VPS36Q06696 MRP2YPR166C 348 nt5.03□□□□□ -1.6
VPS36Q06696 CBP6YBR120C 489 nt5.03□□□□□ -1.6
VPS36Q06696 DED81YHR019C 1665 nt5.02□□□□□ -1.61
VPS36Q06696 BLM10YFL007W 6432 nt5.02□□□□□ -1.61
VPS36Q06696 YFL012WYFL012W 447 nt5.02□□□□□ -1.61
VPS36Q06696 SPO11YHL022C 1197 nt5.02□□□□□ -1.61
VPS36Q06696 YLR156WYLR156W 345 nt5.02□□□□□ -1.61
VPS36Q06696 YLR157W-DYLR157W-D 213 nt5.02□□□□□ -1.61
VPS36Q06696 YLR159WYLR159W 345 nt5.02□□□□□ -1.61
VPS36Q06696 YLR161WYLR161W 345 nt5.02□□□□□ -1.61
VPS36Q06696 HLJ1YMR161W 675 nt5.02□□□□□ -1.61
VPS36Q06696 SOL1YNR034W 966 nt5.02□□□□□ -1.61
VPS36Q06696 YPR195CYPR195C 330 nt5.02□□□□□ -1.61
VPS36Q06696 YBR219CYBR219C 384 nt5.02□□□□□ -1.61
VPS36Q06696 CPS1YJL172W 1731 nt5.02□□□□□ -1.61
VPS36Q06696 ALG1YBR110W 1350 nt5.02□□□□□ -1.61
VPS36Q06696 GEP3YOR205C 1671 nt5.02□□□□□ -1.61
VPS36Q06696 RGP1YDR137W 1992 nt5.02□□□□□ -1.61
VPS36Q06696 VMA13YPR036W 1437 nt5.01□□□□□ -1.61
VPS36Q06696 YGR149WYGR149W 1299 nt5.01□□□□□ -1.61
VPS36Q06696 PEX21YGR239C 867 nt5.01□□□□□ -1.61
VPS36Q06696 YJR071WYJR071W 369 nt5.01□□□□□ -1.61
VPS36Q06696 RPC25YKL144C 639 nt5.01□□□□□ -1.61
VPS36Q06696 PER33YLR064W 822 nt5.01□□□□□ -1.61
VPS36Q06696 EAF7YNL136W 1278 nt5.01□□□□□ -1.61
VPS36Q06696 SPS19YNL202W 879 nt5.01□□□□□ -1.61
VPS36Q06696 RRG9YNL213C 645 nt5.01□□□□□ -1.61
VPS36Q06696 YBR126W-AYBR126W-A 207 nt5.01□□□□□ -1.61
VPS36Q06696 YBR196C-BYBR196C-B 105 nt5.01□□□□□ -1.61
VPS36Q06696 ARB1YER036C 1833 nt5.01□□□□□ -1.61
VPS36Q06696 TPS3YMR261C 3165 nt5.01□□□□□ -1.61
VPS36Q06696 HRP1YOL123W 1605 nt5.01□□□□□ -1.61
VPS36Q06696 SIF2YBR103W 1608 nt5.01□□□□□ -1.61
VPS36Q06696 FPK1YNR047W 2682 nt5□□□□□ -1.61
VPS36Q06696 ERG4YGL012W 1422 nt5□□□□□ -1.61
VPS36Q06696 MSC7YHR039C 1935 nt5□□□□□ -1.61
VPS36Q06696 KXD1YGL079W 657 nt5□□□□□ -1.61
VPS36Q06696 ZRT1YGL255W 1131 nt5□□□□□ -1.61
VPS36Q06696 YGR022CYGR022C 330 nt5□□□□□ -1.61
VPS36Q06696 HSX1tR(CCU)J 72 nt5□□□□□ -1.61
VPS36Q06696 AAD10YJR155W 867 nt5□□□□□ -1.61
VPS36Q06696 YLR163W-AYLR163W-A 114 nt5□□□□□ -1.61
VPS36Q06696 YMR245WYMR245W 621 nt5□□□□□ -1.61
VPS36Q06696 MRPL22YNL177C 930 nt5□□□□□ -1.61
VPS36Q06696 YOR114WYOR114W 885 nt5□□□□□ -1.61
VPS36Q06696 SED4YCR067C 3198 nt5□□□□□ -1.61
VPS36Q06696 GGA1YDR358W 1674 nt4.99□□□□□ -1.61
VPS36Q06696 SER3YER081W 1410 nt4.99□□□□□ -1.61
VPS36Q06696 YTA12YMR089C 2478 nt4.99□□□□□ -1.61
VPS36Q06696 YDL034WYDL034W 345 nt4.99□□□□□ -1.61
VPS36Q06696 CBP4YGR174C 513 nt4.99□□□□□ -1.61
VPS36Q06696 VMA16YHR026W 642 nt4.99□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 31 ms