Protein–RNA interactions for Protein: P63027

VAMP2, Vesicle-associated membrane protein 2, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2P63027 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.35■□□□□ 0.53
VAMP2P63027 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.35■□□□□ 0.53
VAMP2P63027 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VAMP2P63027 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
VAMP2P63027 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
VAMP2P63027 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.34■□□□□ 0.53
VAMP2P63027 AC007375.3-201ENST00000600936 2314 ntBASIC18.34■□□□□ 0.53
VAMP2P63027 ESRRAP2-201ENST00000418437 1549 ntBASIC18.34■□□□□ 0.53
VAMP2P63027 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
VAMP2P63027 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.34■□□□□ 0.53
VAMP2P63027 AC093536.1-201ENST00000569153 554 ntBASIC18.34■□□□□ 0.53
VAMP2P63027 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
VAMP2P63027 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VAMP2P63027 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.34■□□□□ 0.53
VAMP2P63027 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VAMP2P63027 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VAMP2P63027 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
VAMP2P63027 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VAMP2P63027 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
VAMP2P63027 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VAMP2P63027 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
VAMP2P63027 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
VAMP2P63027 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.33■□□□□ 0.53
VAMP2P63027 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.33■□□□□ 0.53
VAMP2P63027 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
VAMP2P63027 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VAMP2P63027 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
VAMP2P63027 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
VAMP2P63027 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.33■□□□□ 0.52
VAMP2P63027 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.33■□□□□ 0.52
VAMP2P63027 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.33■□□□□ 0.52
VAMP2P63027 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
VAMP2P63027 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VAMP2P63027 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
VAMP2P63027 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
VAMP2P63027 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VAMP2P63027 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.33■□□□□ 0.52
VAMP2P63027 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.33■□□□□ 0.52
VAMP2P63027 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.33■□□□□ 0.52
VAMP2P63027 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VAMP2P63027 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VAMP2P63027 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
VAMP2P63027 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
VAMP2P63027 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VAMP2P63027 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VAMP2P63027 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VAMP2P63027 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VAMP2P63027 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.32■□□□□ 0.52
VAMP2P63027 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VAMP2P63027 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VAMP2P63027 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.32■□□□□ 0.52
VAMP2P63027 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VAMP2P63027 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VAMP2P63027 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VAMP2P63027 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VAMP2P63027 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
VAMP2P63027 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.31■□□□□ 0.52
VAMP2P63027 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VAMP2P63027 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VAMP2P63027 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
VAMP2P63027 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
VAMP2P63027 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VAMP2P63027 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VAMP2P63027 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
VAMP2P63027 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VAMP2P63027 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
VAMP2P63027 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.31■□□□□ 0.52
VAMP2P63027 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VAMP2P63027 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VAMP2P63027 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VAMP2P63027 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
VAMP2P63027 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.3■□□□□ 0.52
VAMP2P63027 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
VAMP2P63027 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.3■□□□□ 0.52
VAMP2P63027 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VAMP2P63027 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VAMP2P63027 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
VAMP2P63027 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.29■□□□□ 0.52
VAMP2P63027 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
VAMP2P63027 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VAMP2P63027 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VAMP2P63027 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VAMP2P63027 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
VAMP2P63027 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VAMP2P63027 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VAMP2P63027 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.29■□□□□ 0.52
VAMP2P63027 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VAMP2P63027 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.28■□□□□ 0.52
VAMP2P63027 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VAMP2P63027 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VAMP2P63027 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.28■□□□□ 0.52
VAMP2P63027 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.28■□□□□ 0.52
VAMP2P63027 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.28■□□□□ 0.52
VAMP2P63027 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
VAMP2P63027 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VAMP2P63027 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
VAMP2P63027 AC090877.2-201ENST00000558441 1738 ntBASIC18.28■□□□□ 0.52
VAMP2P63027 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VAMP2P63027 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VAMP2P63027 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms