Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RPS4XP62701 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPS4XP62701 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RPS4XP62701 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPS4XP62701 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPS4XP62701 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.26■□□□□ 0.83
RPS4XP62701 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.26■□□□□ 0.83
RPS4XP62701 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.26■□□□□ 0.83
RPS4XP62701 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPS4XP62701 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RPS4XP62701 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RPS4XP62701 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPS4XP62701 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPS4XP62701 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.25■□□□□ 0.83
RPS4XP62701 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPS4XP62701 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RPS4XP62701 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPS4XP62701 AC092028.1-203ENST00000608262 953 ntBASIC20.25■□□□□ 0.83
RPS4XP62701 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPS4XP62701 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPS4XP62701 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPS4XP62701 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPS4XP62701 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RPS4XP62701 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPS4XP62701 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RPS4XP62701 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPS4XP62701 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPS4XP62701 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPS4XP62701 C1orf229-201ENST00000623686 2258 ntBASIC20.24■□□□□ 0.83
RPS4XP62701 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.24■□□□□ 0.83
RPS4XP62701 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPS4XP62701 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RPS4XP62701 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.24■□□□□ 0.83
RPS4XP62701 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.24■□□□□ 0.83
RPS4XP62701 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RPS4XP62701 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
RPS4XP62701 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPS4XP62701 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.24■□□□□ 0.83
RPS4XP62701 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RPS4XP62701 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPS4XP62701 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RPS4XP62701 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.23■□□□□ 0.83
RPS4XP62701 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPS4XP62701 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPS4XP62701 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPS4XP62701 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPS4XP62701 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.23■□□□□ 0.83
RPS4XP62701 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.23■□□□□ 0.83
RPS4XP62701 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RPS4XP62701 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.23■□□□□ 0.83
RPS4XP62701 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPS4XP62701 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.23■□□□□ 0.83
RPS4XP62701 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPS4XP62701 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RPS4XP62701 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.23■□□□□ 0.83
RPS4XP62701 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.23■□□□□ 0.83
RPS4XP62701 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.23■□□□□ 0.83
RPS4XP62701 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RPS4XP62701 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.22■□□□□ 0.83
RPS4XP62701 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RPS4XP62701 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RPS4XP62701 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RPS4XP62701 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
RPS4XP62701 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.22■□□□□ 0.83
RPS4XP62701 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPS4XP62701 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
RPS4XP62701 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPS4XP62701 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPS4XP62701 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RPS4XP62701 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RPS4XP62701 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RPS4XP62701 AC079834.2-201ENST00000609776 1949 ntBASIC20.21■□□□□ 0.83
RPS4XP62701 AC233723.2-201ENST00000623798 2106 ntBASIC20.21■□□□□ 0.83
RPS4XP62701 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPS4XP62701 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RPS4XP62701 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPS4XP62701 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.21■□□□□ 0.83
RPS4XP62701 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPS4XP62701 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.21■□□□□ 0.83
RPS4XP62701 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RPS4XP62701 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPS4XP62701 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPS4XP62701 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RPS4XP62701 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RPS4XP62701 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RPS4XP62701 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RPS4XP62701 AL117328.2-201ENST00000624617 1940 ntBASIC20.2■□□□□ 0.82
RPS4XP62701 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPS4XP62701 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.2■□□□□ 0.82
RPS4XP62701 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.2■□□□□ 0.82
RPS4XP62701 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.2■□□□□ 0.82
RPS4XP62701 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPS4XP62701 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RPS4XP62701 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RPS4XP62701 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RPS4XP62701 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RPS4XP62701 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RPS4XP62701 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPS4XP62701 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RPS4XP62701 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms