Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LSM6P62312 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LSM6P62312 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LSM6P62312 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.67■□□□□ 0.74
LSM6P62312 TSPY9P-201ENST00000440215 945 ntBASIC19.67■□□□□ 0.74
LSM6P62312 TSPY11P-201ENST00000442607 1045 ntBASIC19.67■□□□□ 0.74
LSM6P62312 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.67■□□□□ 0.74
LSM6P62312 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.67■□□□□ 0.74
LSM6P62312 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LSM6P62312 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.67■□□□□ 0.74
LSM6P62312 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.67■□□□□ 0.74
LSM6P62312 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LSM6P62312 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LSM6P62312 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM6P62312 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM6P62312 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.66■□□□□ 0.74
LSM6P62312 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM6P62312 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
LSM6P62312 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM6P62312 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LSM6P62312 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.66■□□□□ 0.74
LSM6P62312 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LSM6P62312 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.65■□□□□ 0.74
LSM6P62312 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LSM6P62312 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM6P62312 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM6P62312 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM6P62312 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LSM6P62312 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM6P62312 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.65■□□□□ 0.74
LSM6P62312 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
LSM6P62312 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.65■□□□□ 0.74
LSM6P62312 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.65■□□□□ 0.74
LSM6P62312 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LSM6P62312 AL035685.1-201ENST00000636663 812 ntBASIC19.65■□□□□ 0.74
LSM6P62312 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.65■□□□□ 0.74
LSM6P62312 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM6P62312 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
LSM6P62312 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM6P62312 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LSM6P62312 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.65■□□□□ 0.74
LSM6P62312 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.64■□□□□ 0.74
LSM6P62312 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
LSM6P62312 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
LSM6P62312 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LSM6P62312 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LSM6P62312 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LSM6P62312 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LSM6P62312 MIR6724-1-201ENST00000616420 92 ntBASIC19.64■□□□□ 0.73
LSM6P62312 MIR6724-2-201ENST00000616483 92 ntBASIC19.64■□□□□ 0.73
LSM6P62312 MIR6724-4-201ENST00000617390 92 ntBASIC19.64■□□□□ 0.73
LSM6P62312 MIR6724-3-201ENST00000622482 92 ntBASIC19.64■□□□□ 0.73
LSM6P62312 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
LSM6P62312 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LSM6P62312 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LSM6P62312 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.64■□□□□ 0.73
LSM6P62312 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LSM6P62312 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LSM6P62312 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.63■□□□□ 0.73
LSM6P62312 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LSM6P62312 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSM6P62312 LINC01529-204ENST00000636474 1715 ntBASIC19.63■□□□□ 0.73
LSM6P62312 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
LSM6P62312 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSM6P62312 UNC93B8-201ENST00000511903 705 ntBASIC19.63■□□□□ 0.73
LSM6P62312 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.63■□□□□ 0.73
LSM6P62312 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.63■□□□□ 0.73
LSM6P62312 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LSM6P62312 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LSM6P62312 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
LSM6P62312 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LSM6P62312 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.62■□□□□ 0.73
LSM6P62312 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSM6P62312 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.62■□□□□ 0.73
LSM6P62312 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.62■□□□□ 0.73
LSM6P62312 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.62■□□□□ 0.73
LSM6P62312 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSM6P62312 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
LSM6P62312 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LSM6P62312 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LSM6P62312 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.62■□□□□ 0.73
LSM6P62312 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.62■□□□□ 0.73
LSM6P62312 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LSM6P62312 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LSM6P62312 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
LSM6P62312 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.62■□□□□ 0.73
LSM6P62312 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LSM6P62312 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
LSM6P62312 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSM6P62312 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LSM6P62312 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
LSM6P62312 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSM6P62312 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSM6P62312 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.61■□□□□ 0.73
LSM6P62312 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LSM6P62312 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LSM6P62312 AC009102.2-201ENST00000606772 1639 ntBASIC19.61■□□□□ 0.73
LSM6P62312 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
LSM6P62312 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LSM6P62312 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms