Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPS3AP61247 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
RPS3AP61247 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.82■□□□□ 0.92
RPS3AP61247 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPS3AP61247 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPS3AP61247 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPS3AP61247 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPS3AP61247 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.81■□□□□ 0.92
RPS3AP61247 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPS3AP61247 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.81■□□□□ 0.92
RPS3AP61247 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPS3AP61247 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPS3AP61247 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPS3AP61247 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPS3AP61247 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.8■□□□□ 0.92
RPS3AP61247 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.8■□□□□ 0.92
RPS3AP61247 KRT16P3-201ENST00000439127 1283 ntBASIC20.8■□□□□ 0.92
RPS3AP61247 MTDHP2-201ENST00000601468 714 ntBASIC20.8■□□□□ 0.92
RPS3AP61247 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.8■□□□□ 0.92
RPS3AP61247 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPS3AP61247 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPS3AP61247 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
RPS3AP61247 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.79■□□□□ 0.92
RPS3AP61247 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPS3AP61247 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.79■□□□□ 0.92
RPS3AP61247 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.79■□□□□ 0.92
RPS3AP61247 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPS3AP61247 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.79■□□□□ 0.92
RPS3AP61247 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RPS3AP61247 AL356441.2-201ENST00000443009 864 ntBASIC20.79■□□□□ 0.92
RPS3AP61247 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.79■□□□□ 0.92
RPS3AP61247 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.79■□□□□ 0.92
RPS3AP61247 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPS3AP61247 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RPS3AP61247 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.79■□□□□ 0.92
RPS3AP61247 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPS3AP61247 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPS3AP61247 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.79■□□□□ 0.92
RPS3AP61247 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.78■□□□□ 0.92
RPS3AP61247 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPS3AP61247 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
RPS3AP61247 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPS3AP61247 AC007375.3-201ENST00000600936 2314 ntBASIC20.78■□□□□ 0.92
RPS3AP61247 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPS3AP61247 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPS3AP61247 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RPS3AP61247 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.78■□□□□ 0.92
RPS3AP61247 UNC93B8-201ENST00000511903 705 ntBASIC20.78■□□□□ 0.92
RPS3AP61247 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPS3AP61247 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RPS3AP61247 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPS3AP61247 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPS3AP61247 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPS3AP61247 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.78■□□□□ 0.92
RPS3AP61247 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPS3AP61247 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPS3AP61247 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RPS3AP61247 AC233723.2-201ENST00000623798 2106 ntBASIC20.77■□□□□ 0.92
RPS3AP61247 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPS3AP61247 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.77■□□□□ 0.92
RPS3AP61247 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RPS3AP61247 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.77■□□□□ 0.92
RPS3AP61247 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.77■□□□□ 0.92
RPS3AP61247 AC010997.5-201ENST00000609182 354 ntBASIC20.77■□□□□ 0.92
RPS3AP61247 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPS3AP61247 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPS3AP61247 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPS3AP61247 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
RPS3AP61247 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPS3AP61247 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPS3AP61247 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RPS3AP61247 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RPS3AP61247 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RPS3AP61247 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPS3AP61247 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.76■□□□□ 0.91
RPS3AP61247 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPS3AP61247 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.76■□□□□ 0.91
RPS3AP61247 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPS3AP61247 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPS3AP61247 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RPS3AP61247 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPS3AP61247 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPS3AP61247 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS3AP61247 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS3AP61247 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RPS3AP61247 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPS3AP61247 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS3AP61247 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
RPS3AP61247 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPS3AP61247 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.75■□□□□ 0.91
RPS3AP61247 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.75■□□□□ 0.91
RPS3AP61247 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.75■□□□□ 0.91
RPS3AP61247 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.75■□□□□ 0.91
RPS3AP61247 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.75■□□□□ 0.91
RPS3AP61247 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPS3AP61247 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPS3AP61247 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPS3AP61247 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPS3AP61247 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.74■□□□□ 0.91
RPS3AP61247 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms