Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC142381.2-201ENST00000566120 298 ntBASIC20.09■□□□□ 0.81
CLDN18P56856 DUX4L4-201ENST00000566884 1269 ntBASIC20.09■□□□□ 0.81
CLDN18P56856 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN18P56856 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.09■□□□□ 0.81
CLDN18P56856 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.09■□□□□ 0.81
CLDN18P56856 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN18P56856 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CLDN18P56856 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
CLDN18P56856 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN18P56856 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN18P56856 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
CLDN18P56856 AP001330.3-201ENST00000520123 633 ntBASIC20.08■□□□□ 0.81
CLDN18P56856 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
CLDN18P56856 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN18P56856 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN18P56856 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN18P56856 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN18P56856 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN18P56856 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN18P56856 LINC01529-204ENST00000636474 1715 ntBASIC20.07■□□□□ 0.8
CLDN18P56856 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN18P56856 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CLDN18P56856 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN18P56856 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN18P56856 AF213884.3-201ENST00000563833 479 ntBASIC20.07■□□□□ 0.8
CLDN18P56856 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.07■□□□□ 0.8
CLDN18P56856 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
CLDN18P56856 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN18P56856 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
CLDN18P56856 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN18P56856 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN18P56856 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CLDN18P56856 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.06■□□□□ 0.8
CLDN18P56856 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN18P56856 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.06■□□□□ 0.8
CLDN18P56856 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.06■□□□□ 0.8
CLDN18P56856 MIR939-201ENST00000401314 82 ntBASIC20.06■□□□□ 0.8
CLDN18P56856 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN18P56856 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN18P56856 AL499627.2-201ENST00000606283 725 ntBASIC20.06■□□□□ 0.8
CLDN18P56856 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.06■□□□□ 0.8
CLDN18P56856 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.06■□□□□ 0.8
CLDN18P56856 AL136967.2-201ENST00000623968 743 ntBASIC20.06■□□□□ 0.8
CLDN18P56856 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN18P56856 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN18P56856 AC079630.1-202ENST00000618127 1840 ntBASIC20.06■□□□□ 0.8
CLDN18P56856 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN18P56856 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CLDN18P56856 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN18P56856 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN18P56856 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.05■□□□□ 0.8
CLDN18P56856 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CLDN18P56856 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.05■□□□□ 0.8
CLDN18P56856 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.05■□□□□ 0.8
CLDN18P56856 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN18P56856 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.05■□□□□ 0.8
CLDN18P56856 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.05■□□□□ 0.8
CLDN18P56856 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN18P56856 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CLDN18P56856 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN18P56856 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLDN18P56856 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CLDN18P56856 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN18P56856 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN18P56856 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN18P56856 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN18P56856 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN18P56856 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CLDN18P56856 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN18P56856 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN18P56856 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CLDN18P56856 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLDN18P56856 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.04■□□□□ 0.8
CLDN18P56856 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.04■□□□□ 0.8
CLDN18P56856 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CLDN18P56856 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.03■□□□□ 0.8
CLDN18P56856 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN18P56856 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN18P56856 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN18P56856 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.03■□□□□ 0.8
CLDN18P56856 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.03■□□□□ 0.8
CLDN18P56856 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN18P56856 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.03■□□□□ 0.8
CLDN18P56856 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.03■□□□□ 0.8
CLDN18P56856 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN18P56856 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN18P56856 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CLDN18P56856 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN18P56856 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN18P56856 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLDN18P56856 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.02■□□□□ 0.8
CLDN18P56856 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN18P56856 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN18P56856 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN18P56856 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN18P56856 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.02■□□□□ 0.8
CLDN18P56856 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.02■□□□□ 0.8
CLDN18P56856 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLDN18P56856 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CLDN18P56856 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms