Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SLC25A1P53007 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC25A1P53007 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC25A1P53007 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC25A1P53007 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SLC25A1P53007 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SLC25A1P53007 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.92■□□□□ 0.78
SLC25A1P53007 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.92■□□□□ 0.78
SLC25A1P53007 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC25A1P53007 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
SLC25A1P53007 AC103724.3-201ENST00000564481 992 ntBASIC19.92■□□□□ 0.78
SLC25A1P53007 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.92■□□□□ 0.78
SLC25A1P53007 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SLC25A1P53007 AC137630.3-201ENST00000607245 391 ntBASIC19.92■□□□□ 0.78
SLC25A1P53007 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SLC25A1P53007 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC25A1P53007 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC25A1P53007 AC127496.7-201ENST00000625110 1798 ntBASIC19.92■□□□□ 0.78
SLC25A1P53007 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SLC25A1P53007 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SLC25A1P53007 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SLC25A1P53007 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.92■□□□□ 0.78
SLC25A1P53007 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.92■□□□□ 0.78
SLC25A1P53007 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC25A1P53007 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC25A1P53007 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC25A1P53007 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC25A1P53007 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SLC25A1P53007 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC25A1P53007 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC25A1P53007 YBX1P4-201ENST00000392794 808 ntBASIC19.91■□□□□ 0.78
SLC25A1P53007 AL033527.3-201ENST00000566366 1196 ntBASIC19.91■□□□□ 0.78
SLC25A1P53007 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC25A1P53007 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.91■□□□□ 0.78
SLC25A1P53007 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.91■□□□□ 0.78
SLC25A1P53007 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
SLC25A1P53007 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SLC25A1P53007 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC25A1P53007 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC25A1P53007 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC25A1P53007 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC25A1P53007 AC242852.2-201ENST00000615738 1807 ntBASIC19.9■□□□□ 0.78
SLC25A1P53007 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC25A1P53007 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.9■□□□□ 0.78
SLC25A1P53007 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.9■□□□□ 0.78
SLC25A1P53007 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC25A1P53007 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.9■□□□□ 0.78
SLC25A1P53007 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SLC25A1P53007 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SLC25A1P53007 AC144652.1-201ENST00000609974 1624 ntBASIC19.9■□□□□ 0.78
SLC25A1P53007 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC25A1P53007 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SLC25A1P53007 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SLC25A1P53007 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SLC25A1P53007 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC25A1P53007 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SLC25A1P53007 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.89■□□□□ 0.77
SLC25A1P53007 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC25A1P53007 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC25A1P53007 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SLC25A1P53007 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SLC25A1P53007 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.89■□□□□ 0.77
SLC25A1P53007 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.89■□□□□ 0.77
SLC25A1P53007 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.88■□□□□ 0.77
SLC25A1P53007 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SLC25A1P53007 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC25A1P53007 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
SLC25A1P53007 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC25A1P53007 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC25A1P53007 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC25A1P53007 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC25A1P53007 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.88■□□□□ 0.77
SLC25A1P53007 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.88■□□□□ 0.77
SLC25A1P53007 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC25A1P53007 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SLC25A1P53007 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SLC25A1P53007 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC25A1P53007 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SLC25A1P53007 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLC25A1P53007 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC25A1P53007 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.87■□□□□ 0.77
SLC25A1P53007 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC25A1P53007 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SLC25A1P53007 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.87■□□□□ 0.77
SLC25A1P53007 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SLC25A1P53007 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.87■□□□□ 0.77
SLC25A1P53007 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
SLC25A1P53007 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC25A1P53007 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.86■□□□□ 0.77
SLC25A1P53007 KRT8P33-201ENST00000508125 1423 ntBASIC19.86■□□□□ 0.77
SLC25A1P53007 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SLC25A1P53007 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
SLC25A1P53007 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.86■□□□□ 0.77
SLC25A1P53007 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.86■□□□□ 0.77
SLC25A1P53007 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.86■□□□□ 0.77
SLC25A1P53007 MIR6722-201ENST00000617286 78 ntBASIC19.86■□□□□ 0.77
SLC25A1P53007 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SLC25A1P53007 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.86■□□□□ 0.77
SLC25A1P53007 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.86■□□□□ 0.77
SLC25A1P53007 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms