Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LHX2P50458 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LHX2P50458 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LHX2P50458 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LHX2P50458 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LHX2P50458 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LHX2P50458 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LHX2P50458 AP001330.3-201ENST00000520123 633 ntBASIC20.1■□□□□ 0.81
LHX2P50458 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LHX2P50458 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.1■□□□□ 0.81
LHX2P50458 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
LHX2P50458 LINC01529-204ENST00000636474 1715 ntBASIC20.1■□□□□ 0.81
LHX2P50458 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LHX2P50458 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LHX2P50458 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LHX2P50458 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
LHX2P50458 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LHX2P50458 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LHX2P50458 AF213884.3-201ENST00000563833 479 ntBASIC20.09■□□□□ 0.81
LHX2P50458 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.09■□□□□ 0.81
LHX2P50458 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.09■□□□□ 0.81
LHX2P50458 AL136967.2-201ENST00000623968 743 ntBASIC20.09■□□□□ 0.81
LHX2P50458 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
LHX2P50458 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
LHX2P50458 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
LHX2P50458 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
LHX2P50458 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
LHX2P50458 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LHX2P50458 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LHX2P50458 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.08■□□□□ 0.81
LHX2P50458 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LHX2P50458 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LHX2P50458 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.08■□□□□ 0.81
LHX2P50458 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.08■□□□□ 0.81
LHX2P50458 MIR939-201ENST00000401314 82 ntBASIC20.08■□□□□ 0.81
LHX2P50458 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LHX2P50458 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.08■□□□□ 0.81
LHX2P50458 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.08■□□□□ 0.81
LHX2P50458 AC079630.1-202ENST00000618127 1840 ntBASIC20.08■□□□□ 0.8
LHX2P50458 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LHX2P50458 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LHX2P50458 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LHX2P50458 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LHX2P50458 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LHX2P50458 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LHX2P50458 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LHX2P50458 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LHX2P50458 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LHX2P50458 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.07■□□□□ 0.8
LHX2P50458 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
LHX2P50458 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.07■□□□□ 0.8
LHX2P50458 AL499627.2-201ENST00000606283 725 ntBASIC20.07■□□□□ 0.8
LHX2P50458 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
LHX2P50458 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.07■□□□□ 0.8
LHX2P50458 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LHX2P50458 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
LHX2P50458 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LHX2P50458 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.07■□□□□ 0.8
LHX2P50458 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.07■□□□□ 0.8
LHX2P50458 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LHX2P50458 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
LHX2P50458 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.06■□□□□ 0.8
LHX2P50458 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LHX2P50458 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LHX2P50458 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.06■□□□□ 0.8
LHX2P50458 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.06■□□□□ 0.8
LHX2P50458 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.06■□□□□ 0.8
LHX2P50458 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LHX2P50458 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.06■□□□□ 0.8
LHX2P50458 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LHX2P50458 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.05■□□□□ 0.8
LHX2P50458 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.05■□□□□ 0.8
LHX2P50458 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.05■□□□□ 0.8
LHX2P50458 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LHX2P50458 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
LHX2P50458 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LHX2P50458 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
LHX2P50458 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.05■□□□□ 0.8
LHX2P50458 AC133637.1-201ENST00000624115 1537 ntBASIC20.05■□□□□ 0.8
LHX2P50458 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LHX2P50458 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LHX2P50458 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LHX2P50458 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
LHX2P50458 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LHX2P50458 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LHX2P50458 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LHX2P50458 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LHX2P50458 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.04■□□□□ 0.8
LHX2P50458 AC091305.1-201ENST00000479476 895 ntBASIC20.04■□□□□ 0.8
LHX2P50458 AC027682.1-201ENST00000562846 899 ntBASIC20.04■□□□□ 0.8
LHX2P50458 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LHX2P50458 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LHX2P50458 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LHX2P50458 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LHX2P50458 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LHX2P50458 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LHX2P50458 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.03■□□□□ 0.8
LHX2P50458 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LHX2P50458 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.03■□□□□ 0.8
LHX2P50458 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms