Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC6A9P48067 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A9P48067 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A9P48067 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A9P48067 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SLC6A9P48067 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SLC6A9P48067 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A9P48067 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC6A9P48067 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A9P48067 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
SLC6A9P48067 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A9P48067 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A9P48067 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A9P48067 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A9P48067 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC6A9P48067 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A9P48067 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A9P48067 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A9P48067 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC6A9P48067 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A9P48067 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SLC6A9P48067 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A9P48067 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC6A9P48067 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC6A9P48067 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.69■□□□□ 0.74
SLC6A9P48067 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC6A9P48067 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SLC6A9P48067 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC6A9P48067 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A9P48067 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SLC6A9P48067 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC6A9P48067 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC6A9P48067 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A9P48067 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC6A9P48067 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC6A9P48067 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
SLC6A9P48067 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A9P48067 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A9P48067 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A9P48067 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A9P48067 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
SLC6A9P48067 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A9P48067 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC6A9P48067 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A9P48067 KRT125P-201ENST00000546827 989 ntBASIC19.68■□□□□ 0.74
SLC6A9P48067 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A9P48067 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.68■□□□□ 0.74
SLC6A9P48067 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A9P48067 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC6A9P48067 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A9P48067 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.67■□□□□ 0.74
SLC6A9P48067 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A9P48067 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A9P48067 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A9P48067 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.67■□□□□ 0.74
SLC6A9P48067 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC6A9P48067 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A9P48067 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A9P48067 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A9P48067 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A9P48067 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A9P48067 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SLC6A9P48067 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A9P48067 AC021242.3-201ENST00000607598 1377 ntBASIC19.67■□□□□ 0.74
SLC6A9P48067 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A9P48067 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A9P48067 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC6A9P48067 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC6A9P48067 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC6A9P48067 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC6A9P48067 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC6A9P48067 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SLC6A9P48067 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SLC6A9P48067 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC6A9P48067 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SLC6A9P48067 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC6A9P48067 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC6A9P48067 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC6A9P48067 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC6A9P48067 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
SLC6A9P48067 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A9P48067 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A9P48067 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A9P48067 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A9P48067 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A9P48067 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A9P48067 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A9P48067 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SLC6A9P48067 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A9P48067 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC6A9P48067 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A9P48067 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC6A9P48067 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SLC6A9P48067 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A9P48067 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A9P48067 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
SLC6A9P48067 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.64■□□□□ 0.74
SLC6A9P48067 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.64■□□□□ 0.74
SLC6A9P48067 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC6A9P48067 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms