Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.25■□□□□ 0.99
RPL3P39023 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RPL3P39023 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
RPL3P39023 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RPL3P39023 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPL3P39023 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPL3P39023 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RPL3P39023 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPL3P39023 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPL3P39023 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
RPL3P39023 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPL3P39023 AL117328.2-201ENST00000624617 1940 ntBASIC21.23■□□□□ 0.99
RPL3P39023 AC233723.2-201ENST00000623798 2106 ntBASIC21.23■□□□□ 0.99
RPL3P39023 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RPL3P39023 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.23■□□□□ 0.99
RPL3P39023 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RPL3P39023 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RPL3P39023 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
RPL3P39023 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.23■□□□□ 0.99
RPL3P39023 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RPL3P39023 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPL3P39023 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPL3P39023 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.23■□□□□ 0.99
RPL3P39023 AC144652.1-201ENST00000609974 1624 ntBASIC21.22■□□□□ 0.99
RPL3P39023 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPL3P39023 AL353803.4-201ENST00000565882 1934 ntBASIC21.22■□□□□ 0.99
RPL3P39023 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPL3P39023 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPL3P39023 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.22■□□□□ 0.99
RPL3P39023 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.22■□□□□ 0.99
RPL3P39023 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.22■□□□□ 0.99
RPL3P39023 ESRRAP2-201ENST00000418437 1549 ntBASIC21.22■□□□□ 0.99
RPL3P39023 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
RPL3P39023 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPL3P39023 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.21■□□□□ 0.99
RPL3P39023 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RPL3P39023 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RPL3P39023 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPL3P39023 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.21■□□□□ 0.99
RPL3P39023 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RPL3P39023 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RPL3P39023 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RPL3P39023 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
RPL3P39023 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPL3P39023 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.2■□□□□ 0.99
RPL3P39023 C1orf229-201ENST00000623686 2258 ntBASIC21.2■□□□□ 0.98
RPL3P39023 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPL3P39023 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RPL3P39023 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPL3P39023 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.2■□□□□ 0.98
RPL3P39023 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPL3P39023 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.2■□□□□ 0.98
RPL3P39023 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.2■□□□□ 0.98
RPL3P39023 Z92544.1-202ENST00000571933 1220 ntBASIC21.2■□□□□ 0.98
RPL3P39023 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.2■□□□□ 0.98
RPL3P39023 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.2■□□□□ 0.98
RPL3P39023 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPL3P39023 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPL3P39023 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPL3P39023 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPL3P39023 KRT125P-201ENST00000546827 989 ntBASIC21.19■□□□□ 0.98
RPL3P39023 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPL3P39023 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RPL3P39023 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.19■□□□□ 0.98
RPL3P39023 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RPL3P39023 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.18■□□□□ 0.98
RPL3P39023 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RPL3P39023 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPL3P39023 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.18■□□□□ 0.98
RPL3P39023 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RPL3P39023 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RPL3P39023 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.18■□□□□ 0.98
RPL3P39023 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.18■□□□□ 0.98
RPL3P39023 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RPL3P39023 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPL3P39023 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RPL3P39023 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.17■□□□□ 0.98
RPL3P39023 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPL3P39023 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.17■□□□□ 0.98
RPL3P39023 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.17■□□□□ 0.98
RPL3P39023 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RPL3P39023 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPL3P39023 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RPL3P39023 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RPL3P39023 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPL3P39023 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.16■□□□□ 0.98
RPL3P39023 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPL3P39023 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RPL3P39023 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.16■□□□□ 0.98
RPL3P39023 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.16■□□□□ 0.98
RPL3P39023 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
RPL3P39023 FP325331.1-202ENST00000623531 1380 ntBASIC21.16■□□□□ 0.98
RPL3P39023 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RPL3P39023 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPL3P39023 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPL3P39023 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.16■□□□□ 0.98
RPL3P39023 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RPL3P39023 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RPL3P39023 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPL3P39023 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms