Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SNCAP37840 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.33■□□□□ 0.53
SNCAP37840 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.33■□□□□ 0.53
SNCAP37840 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.33■□□□□ 0.53
SNCAP37840 AC090877.2-201ENST00000558441 1738 ntBASIC18.33■□□□□ 0.52
SNCAP37840 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC18.33■□□□□ 0.52
SNCAP37840 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.33■□□□□ 0.52
SNCAP37840 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SNCAP37840 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.33■□□□□ 0.52
SNCAP37840 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.33■□□□□ 0.52
SNCAP37840 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNCAP37840 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.33■□□□□ 0.52
SNCAP37840 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SNCAP37840 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNCAP37840 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SNCAP37840 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNCAP37840 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.32■□□□□ 0.52
SNCAP37840 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNCAP37840 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SNCAP37840 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNCAP37840 AL592295.1-201ENST00000400984 884 ntBASIC18.32■□□□□ 0.52
SNCAP37840 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.32■□□□□ 0.52
SNCAP37840 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SNCAP37840 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.32■□□□□ 0.52
SNCAP37840 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
SNCAP37840 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SNCAP37840 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SNCAP37840 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNCAP37840 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
SNCAP37840 AL121603.2-201ENST00000557373 2117 ntBASIC18.31■□□□□ 0.52
SNCAP37840 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNCAP37840 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SNCAP37840 AL592293.1-201ENST00000502889 1188 ntBASIC18.31■□□□□ 0.52
SNCAP37840 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNCAP37840 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.31■□□□□ 0.52
SNCAP37840 MIR6765-201ENST00000614092 87 ntBASIC18.31■□□□□ 0.52
SNCAP37840 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
SNCAP37840 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNCAP37840 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNCAP37840 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNCAP37840 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNCAP37840 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SNCAP37840 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SNCAP37840 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNCAP37840 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNCAP37840 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNCAP37840 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.3■□□□□ 0.52
SNCAP37840 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNCAP37840 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNCAP37840 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNCAP37840 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNCAP37840 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNCAP37840 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SNCAP37840 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNCAP37840 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNCAP37840 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNCAP37840 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNCAP37840 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
SNCAP37840 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SNCAP37840 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNCAP37840 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SNCAP37840 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SNCAP37840 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNCAP37840 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.3■□□□□ 0.52
SNCAP37840 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SNCAP37840 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SNCAP37840 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SNCAP37840 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNCAP37840 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNCAP37840 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
SNCAP37840 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SNCAP37840 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNCAP37840 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SNCAP37840 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNCAP37840 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.28■□□□□ 0.52
SNCAP37840 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNCAP37840 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNCAP37840 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SNCAP37840 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNCAP37840 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNCAP37840 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNCAP37840 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNCAP37840 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.28■□□□□ 0.52
SNCAP37840 AC087393.1-201ENST00000582896 145 ntBASIC18.28■□□□□ 0.52
SNCAP37840 AL161729.1-201ENST00000604104 1402 ntBASIC18.28■□□□□ 0.52
SNCAP37840 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNCAP37840 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SNCAP37840 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
SNCAP37840 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SNCAP37840 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.28■□□□□ 0.52
SNCAP37840 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SNCAP37840 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.28■□□□□ 0.52
SNCAP37840 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SNCAP37840 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNCAP37840 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SNCAP37840 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.27■□□□□ 0.52
SNCAP37840 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SNCAP37840 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SNCAP37840 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SNCAP37840 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms