Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCL1P22362 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCL1P22362 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCL1P22362 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CCL1P22362 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CCL1P22362 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CCL1P22362 MIR6722-201ENST00000617286 78 ntBASIC19.35■□□□□ 0.69
CCL1P22362 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.35■□□□□ 0.69
CCL1P22362 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCL1P22362 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCL1P22362 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCL1P22362 LINC00526-201ENST00000581067 1875 ntBASIC19.35■□□□□ 0.69
CCL1P22362 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCL1P22362 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.34■□□□□ 0.69
CCL1P22362 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCL1P22362 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCL1P22362 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.34■□□□□ 0.69
CCL1P22362 AC021242.3-201ENST00000607598 1377 ntBASIC19.34■□□□□ 0.69
CCL1P22362 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCL1P22362 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCL1P22362 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCL1P22362 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CCL1P22362 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCL1P22362 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCL1P22362 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCL1P22362 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCL1P22362 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.34■□□□□ 0.69
CCL1P22362 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCL1P22362 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.33■□□□□ 0.68
CCL1P22362 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.33■□□□□ 0.68
CCL1P22362 AC127496.7-201ENST00000625110 1798 ntBASIC19.33■□□□□ 0.68
CCL1P22362 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCL1P22362 EP400NL-214ENST00000641289 2402 ntBASIC19.33■□□□□ 0.68
CCL1P22362 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCL1P22362 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCL1P22362 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CCL1P22362 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.32■□□□□ 0.68
CCL1P22362 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.32■□□□□ 0.68
CCL1P22362 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL1P22362 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.32■□□□□ 0.68
CCL1P22362 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL1P22362 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL1P22362 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL1P22362 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCL1P22362 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL1P22362 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL1P22362 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCL1P22362 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL1P22362 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL1P22362 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCL1P22362 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
CCL1P22362 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCL1P22362 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCL1P22362 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL1P22362 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.31■□□□□ 0.68
CCL1P22362 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCL1P22362 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL1P22362 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCL1P22362 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.31■□□□□ 0.68
CCL1P22362 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.3■□□□□ 0.68
CCL1P22362 AC005703.6-201ENST00000623265 1329 ntBASIC19.3■□□□□ 0.68
CCL1P22362 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCL1P22362 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.3■□□□□ 0.68
CCL1P22362 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.3■□□□□ 0.68
CCL1P22362 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCL1P22362 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CCL1P22362 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCL1P22362 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CCL1P22362 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCL1P22362 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
CCL1P22362 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCL1P22362 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCL1P22362 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCL1P22362 AC242852.2-201ENST00000615738 1807 ntBASIC19.3■□□□□ 0.68
CCL1P22362 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCL1P22362 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL1P22362 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL1P22362 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL1P22362 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.29■□□□□ 0.68
CCL1P22362 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.29■□□□□ 0.68
CCL1P22362 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL1P22362 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCL1P22362 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
CCL1P22362 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.29■□□□□ 0.68
CCL1P22362 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CCL1P22362 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.28■□□□□ 0.68
CCL1P22362 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL1P22362 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL1P22362 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.28■□□□□ 0.68
CCL1P22362 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.28■□□□□ 0.68
CCL1P22362 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCL1P22362 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.28■□□□□ 0.68
CCL1P22362 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CCL1P22362 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCL1P22362 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCL1P22362 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CCL1P22362 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCL1P22362 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCL1P22362 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCL1P22362 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms