Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CXCL3P19876 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CXCL3P19876 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.83■□□□□ 0.6
CXCL3P19876 AC148477.6-201ENST00000623746 465 ntBASIC18.83■□□□□ 0.6
CXCL3P19876 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CXCL3P19876 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CXCL3P19876 AC079630.1-202ENST00000618127 1840 ntBASIC18.83■□□□□ 0.6
CXCL3P19876 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CXCL3P19876 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CXCL3P19876 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CXCL3P19876 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CXCL3P19876 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.83■□□□□ 0.6
CXCL3P19876 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CXCL3P19876 FAM99A-202ENST00000538190 1989 ntBASIC18.82■□□□□ 0.6
CXCL3P19876 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL3P19876 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL3P19876 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.82■□□□□ 0.6
CXCL3P19876 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL3P19876 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL3P19876 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL3P19876 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL3P19876 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL3P19876 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL3P19876 AC021231.2-201ENST00000594613 730 ntBASIC18.82■□□□□ 0.6
CXCL3P19876 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.82■□□□□ 0.6
CXCL3P19876 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXCL3P19876 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.82■□□□□ 0.6
CXCL3P19876 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.82■□□□□ 0.6
CXCL3P19876 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.81■□□□□ 0.6
CXCL3P19876 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.81■□□□□ 0.6
CXCL3P19876 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL3P19876 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL3P19876 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL3P19876 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL3P19876 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL3P19876 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CXCL3P19876 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL3P19876 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.81■□□□□ 0.6
CXCL3P19876 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CXCL3P19876 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.81■□□□□ 0.6
CXCL3P19876 AL157384.1-201ENST00000445995 2473 ntBASIC18.81■□□□□ 0.6
CXCL3P19876 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL3P19876 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL3P19876 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL3P19876 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXCL3P19876 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL3P19876 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.8■□□□□ 0.6
CXCL3P19876 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL3P19876 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL3P19876 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL3P19876 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL3P19876 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL3P19876 DUX4L29-201ENST00000425409 679 ntBASIC18.8■□□□□ 0.6
CXCL3P19876 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CXCL3P19876 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL3P19876 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.8■□□□□ 0.6
CXCL3P19876 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.8■□□□□ 0.6
CXCL3P19876 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXCL3P19876 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL3P19876 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL3P19876 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL3P19876 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.79■□□□□ 0.6
CXCL3P19876 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CXCL3P19876 AL161729.1-201ENST00000604104 1402 ntBASIC18.79■□□□□ 0.6
CXCL3P19876 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.79■□□□□ 0.6
CXCL3P19876 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CXCL3P19876 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL3P19876 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CXCL3P19876 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL3P19876 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL3P19876 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL3P19876 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL3P19876 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.78■□□□□ 0.6
CXCL3P19876 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL3P19876 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.78■□□□□ 0.6
CXCL3P19876 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CXCL3P19876 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL3P19876 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CXCL3P19876 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CXCL3P19876 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CXCL3P19876 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.78■□□□□ 0.6
CXCL3P19876 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXCL3P19876 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXCL3P19876 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXCL3P19876 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXCL3P19876 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXCL3P19876 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CXCL3P19876 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.77■□□□□ 0.6
CXCL3P19876 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.77■□□□□ 0.6
CXCL3P19876 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.77■□□□□ 0.6
CXCL3P19876 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CXCL3P19876 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CXCL3P19876 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CXCL3P19876 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.77■□□□□ 0.59
CXCL3P19876 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CXCL3P19876 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CXCL3P19876 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CXCL3P19876 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CXCL3P19876 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.76■□□□□ 0.59
CXCL3P19876 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms