Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRKCAP17252 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRKCAP17252 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PRKCAP17252 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
PRKCAP17252 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PRKCAP17252 AC005703.6-201ENST00000623265 1329 ntBASIC20.61■□□□□ 0.89
PRKCAP17252 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRKCAP17252 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.61■□□□□ 0.89
PRKCAP17252 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRKCAP17252 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.61■□□□□ 0.89
PRKCAP17252 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
PRKCAP17252 KRT16P3-201ENST00000439127 1283 ntBASIC20.61■□□□□ 0.89
PRKCAP17252 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PRKCAP17252 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.61■□□□□ 0.89
PRKCAP17252 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.61■□□□□ 0.89
PRKCAP17252 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRKCAP17252 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRKCAP17252 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
PRKCAP17252 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRKCAP17252 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRKCAP17252 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRKCAP17252 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRKCAP17252 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRKCAP17252 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.6■□□□□ 0.89
PRKCAP17252 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.6■□□□□ 0.89
PRKCAP17252 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRKCAP17252 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PRKCAP17252 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PRKCAP17252 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
PRKCAP17252 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRKCAP17252 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
PRKCAP17252 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.59■□□□□ 0.89
PRKCAP17252 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRKCAP17252 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.59■□□□□ 0.89
PRKCAP17252 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
PRKCAP17252 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRKCAP17252 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.58■□□□□ 0.89
PRKCAP17252 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRKCAP17252 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.89
PRKCAP17252 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PRKCAP17252 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.58■□□□□ 0.89
PRKCAP17252 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRKCAP17252 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
PRKCAP17252 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
PRKCAP17252 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.58■□□□□ 0.88
PRKCAP17252 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRKCAP17252 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
PRKCAP17252 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.58■□□□□ 0.88
PRKCAP17252 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.58■□□□□ 0.88
PRKCAP17252 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRKCAP17252 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRKCAP17252 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.57■□□□□ 0.88
PRKCAP17252 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PRKCAP17252 MIR6724-1-201ENST00000616420 92 ntBASIC20.57■□□□□ 0.88
PRKCAP17252 MIR6724-2-201ENST00000616483 92 ntBASIC20.57■□□□□ 0.88
PRKCAP17252 MIR6724-4-201ENST00000617390 92 ntBASIC20.57■□□□□ 0.88
PRKCAP17252 MIR6724-3-201ENST00000622482 92 ntBASIC20.57■□□□□ 0.88
PRKCAP17252 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.57■□□□□ 0.88
PRKCAP17252 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRKCAP17252 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRKCAP17252 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PRKCAP17252 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.57■□□□□ 0.88
PRKCAP17252 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRKCAP17252 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRKCAP17252 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRKCAP17252 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.56■□□□□ 0.88
PRKCAP17252 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRKCAP17252 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRKCAP17252 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRKCAP17252 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.56■□□□□ 0.88
PRKCAP17252 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.56■□□□□ 0.88
PRKCAP17252 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PRKCAP17252 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PRKCAP17252 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.56■□□□□ 0.88
PRKCAP17252 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.56■□□□□ 0.88
PRKCAP17252 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRKCAP17252 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PRKCAP17252 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PRKCAP17252 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.56■□□□□ 0.88
PRKCAP17252 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRKCAP17252 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRKCAP17252 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRKCAP17252 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.55■□□□□ 0.88
PRKCAP17252 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRKCAP17252 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRKCAP17252 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRKCAP17252 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRKCAP17252 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PRKCAP17252 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRKCAP17252 AL356441.2-201ENST00000443009 864 ntBASIC20.54■□□□□ 0.88
PRKCAP17252 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.54■□□□□ 0.88
PRKCAP17252 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PRKCAP17252 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PRKCAP17252 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PRKCAP17252 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRKCAP17252 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRKCAP17252 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.54■□□□□ 0.88
PRKCAP17252 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PRKCAP17252 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PRKCAP17252 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms