Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC30■■■□□ 2.39
CSB-PGBD3P0DP91 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC30■■■□□ 2.39
CSB-PGBD3P0DP91 AC145676.1-201ENST00000514988 2004 ntBASIC30■■■□□ 2.39
CSB-PGBD3P0DP91 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CSB-PGBD3P0DP91 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC30■■■□□ 2.39
CSB-PGBD3P0DP91 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CSB-PGBD3P0DP91 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CSB-PGBD3P0DP91 VPS53-216ENST00000574029 585 ntTSL 4 BASIC30■■■□□ 2.39
CSB-PGBD3P0DP91 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
CSB-PGBD3P0DP91 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
CSB-PGBD3P0DP91 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC29.99■■■□□ 2.39
CSB-PGBD3P0DP91 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC29.99■■■□□ 2.39
CSB-PGBD3P0DP91 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC29.99■■■□□ 2.39
CSB-PGBD3P0DP91 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
CSB-PGBD3P0DP91 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC29.99■■■□□ 2.39
CSB-PGBD3P0DP91 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC29.99■■■□□ 2.39
CSB-PGBD3P0DP91 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC29.99■■■□□ 2.39
CSB-PGBD3P0DP91 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
CSB-PGBD3P0DP91 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC29.98■■■□□ 2.39
CSB-PGBD3P0DP91 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
CSB-PGBD3P0DP91 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
CSB-PGBD3P0DP91 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC29.98■■■□□ 2.39
CSB-PGBD3P0DP91 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC29.98■■■□□ 2.39
CSB-PGBD3P0DP91 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC29.98■■■□□ 2.39
CSB-PGBD3P0DP91 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
CSB-PGBD3P0DP91 TERF1P2-201ENST00000583350 1212 ntBASIC29.98■■■□□ 2.39
CSB-PGBD3P0DP91 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
CSB-PGBD3P0DP91 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
CSB-PGBD3P0DP91 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC29.98■■■□□ 2.39
CSB-PGBD3P0DP91 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CSB-PGBD3P0DP91 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
CSB-PGBD3P0DP91 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC29.97■■■□□ 2.39
CSB-PGBD3P0DP91 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC29.97■■■□□ 2.39
CSB-PGBD3P0DP91 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CSB-PGBD3P0DP91 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC29.97■■■□□ 2.39
CSB-PGBD3P0DP91 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CSB-PGBD3P0DP91 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC29.96■■■□□ 2.39
CSB-PGBD3P0DP91 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
CSB-PGBD3P0DP91 AL499627.2-201ENST00000606283 725 ntBASIC29.96■■■□□ 2.39
CSB-PGBD3P0DP91 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
CSB-PGBD3P0DP91 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC29.95■■■□□ 2.39
CSB-PGBD3P0DP91 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC29.95■■■□□ 2.39
CSB-PGBD3P0DP91 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
CSB-PGBD3P0DP91 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC29.95■■■□□ 2.39
CSB-PGBD3P0DP91 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.39
CSB-PGBD3P0DP91 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
CSB-PGBD3P0DP91 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
CSB-PGBD3P0DP91 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CSB-PGBD3P0DP91 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CSB-PGBD3P0DP91 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
CSB-PGBD3P0DP91 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
CSB-PGBD3P0DP91 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
CSB-PGBD3P0DP91 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CSB-PGBD3P0DP91 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC29.94■■■□□ 2.38
CSB-PGBD3P0DP91 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CSB-PGBD3P0DP91 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CSB-PGBD3P0DP91 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CSB-PGBD3P0DP91 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CSB-PGBD3P0DP91 LHPP-203ENST00000392757 840 ntTSL 3 BASIC29.93■■■□□ 2.38
CSB-PGBD3P0DP91 NT5C3AP1-201ENST00000394500 1012 ntBASIC29.93■■■□□ 2.38
CSB-PGBD3P0DP91 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC29.93■■■□□ 2.38
CSB-PGBD3P0DP91 OR2I1P-207ENST00000453522 948 ntBASIC29.93■■■□□ 2.38
CSB-PGBD3P0DP91 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC29.93■■■□□ 2.38
CSB-PGBD3P0DP91 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC29.93■■■□□ 2.38
CSB-PGBD3P0DP91 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
CSB-PGBD3P0DP91 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC29.93■■■□□ 2.38
CSB-PGBD3P0DP91 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC29.93■■■□□ 2.38
CSB-PGBD3P0DP91 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC29.93■■■□□ 2.38
CSB-PGBD3P0DP91 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CSB-PGBD3P0DP91 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
CSB-PGBD3P0DP91 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CSB-PGBD3P0DP91 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CSB-PGBD3P0DP91 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CSB-PGBD3P0DP91 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC29.92■■■□□ 2.38
CSB-PGBD3P0DP91 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC29.92■■■□□ 2.38
CSB-PGBD3P0DP91 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CSB-PGBD3P0DP91 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC29.92■■■□□ 2.38
CSB-PGBD3P0DP91 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC29.91■■■□□ 2.38
CSB-PGBD3P0DP91 DENND3-207ENST00000518347 850 ntTSL 2 BASIC29.91■■■□□ 2.38
CSB-PGBD3P0DP91 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CSB-PGBD3P0DP91 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CSB-PGBD3P0DP91 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CSB-PGBD3P0DP91 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC29.9■■■□□ 2.38
CSB-PGBD3P0DP91 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CSB-PGBD3P0DP91 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
CSB-PGBD3P0DP91 ME3-201ENST00000323418 1068 ntTSL 5 BASIC29.9■■■□□ 2.38
CSB-PGBD3P0DP91 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC29.9■■■□□ 2.38
CSB-PGBD3P0DP91 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC29.9■■■□□ 2.38
CSB-PGBD3P0DP91 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC29.9■■■□□ 2.38
CSB-PGBD3P0DP91 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC29.9■■■□□ 2.38
CSB-PGBD3P0DP91 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC29.9■■■□□ 2.38
CSB-PGBD3P0DP91 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
CSB-PGBD3P0DP91 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CSB-PGBD3P0DP91 TMEM202-AS1-202ENST00000565181 2325 ntBASIC29.89■■■□□ 2.38
CSB-PGBD3P0DP91 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CSB-PGBD3P0DP91 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.38
CSB-PGBD3P0DP91 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC29.89■■■□□ 2.38
CSB-PGBD3P0DP91 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC29.89■■■□□ 2.38
CSB-PGBD3P0DP91 MPST-204ENST00000404393 1329 ntTSL 5 BASIC29.89■■■□□ 2.38
CSB-PGBD3P0DP91 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC29.89■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms