Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.51■■□□□ 1.03
CCNYL3P0C7X3 AC105265.2-201ENST00000467189 838 ntBASIC21.51■■□□□ 1.03
CCNYL3P0C7X3 AC091305.1-201ENST00000479476 895 ntBASIC21.51■■□□□ 1.03
CCNYL3P0C7X3 RARRES2P6-201ENST00000567333 442 ntBASIC21.51■■□□□ 1.03
CCNYL3P0C7X3 MIR4767-201ENST00000582827 78 ntBASIC21.51■■□□□ 1.03
CCNYL3P0C7X3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNYL3P0C7X3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.51■■□□□ 1.03
CCNYL3P0C7X3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.5■■□□□ 1.03
CCNYL3P0C7X3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CCNYL3P0C7X3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.5■■□□□ 1.03
CCNYL3P0C7X3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.5■■□□□ 1.03
CCNYL3P0C7X3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CCNYL3P0C7X3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.5■■□□□ 1.03
CCNYL3P0C7X3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNYL3P0C7X3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CCNYL3P0C7X3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CCNYL3P0C7X3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CCNYL3P0C7X3 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CCNYL3P0C7X3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.49■■□□□ 1.03
CCNYL3P0C7X3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNYL3P0C7X3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CCNYL3P0C7X3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.49■■□□□ 1.03
CCNYL3P0C7X3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNYL3P0C7X3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNYL3P0C7X3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNYL3P0C7X3 AC011298.3-201ENST00000615796 283 ntBASIC21.49■■□□□ 1.03
CCNYL3P0C7X3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNYL3P0C7X3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CCNYL3P0C7X3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.48■■□□□ 1.03
CCNYL3P0C7X3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCNYL3P0C7X3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CCNYL3P0C7X3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CCNYL3P0C7X3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCNYL3P0C7X3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCNYL3P0C7X3 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.48■■□□□ 1.03
CCNYL3P0C7X3 AP001330.3-201ENST00000520123 633 ntBASIC21.48■■□□□ 1.03
CCNYL3P0C7X3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CCNYL3P0C7X3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.48■■□□□ 1.03
CCNYL3P0C7X3 C17orf82-201ENST00000623772 1530 ntBASIC21.48■■□□□ 1.03
CCNYL3P0C7X3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.48■■□□□ 1.03
CCNYL3P0C7X3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CCNYL3P0C7X3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNYL3P0C7X3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CCNYL3P0C7X3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNYL3P0C7X3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCNYL3P0C7X3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCNYL3P0C7X3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.47■■□□□ 1.03
CCNYL3P0C7X3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.47■■□□□ 1.03
CCNYL3P0C7X3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CCNYL3P0C7X3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.47■■□□□ 1.03
CCNYL3P0C7X3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.47■■□□□ 1.03
CCNYL3P0C7X3 RASA4CP-201ENST00000424092 1398 ntBASIC21.47■■□□□ 1.03
CCNYL3P0C7X3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CCNYL3P0C7X3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CCNYL3P0C7X3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNYL3P0C7X3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNYL3P0C7X3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNYL3P0C7X3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNYL3P0C7X3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCNYL3P0C7X3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.46■■□□□ 1.03
CCNYL3P0C7X3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNYL3P0C7X3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCNYL3P0C7X3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.46■■□□□ 1.03
CCNYL3P0C7X3 HLA-L-211ENST00000482052 1765 ntBASIC21.46■■□□□ 1.03
CCNYL3P0C7X3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.46■■□□□ 1.03
CCNYL3P0C7X3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.45■■□□□ 1.02
CCNYL3P0C7X3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.45■■□□□ 1.02
CCNYL3P0C7X3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.45■■□□□ 1.02
CCNYL3P0C7X3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.45■■□□□ 1.02
CCNYL3P0C7X3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCNYL3P0C7X3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNYL3P0C7X3 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.45■■□□□ 1.02
CCNYL3P0C7X3 AC027682.1-201ENST00000562846 899 ntBASIC21.45■■□□□ 1.02
CCNYL3P0C7X3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.45■■□□□ 1.02
CCNYL3P0C7X3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCNYL3P0C7X3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCNYL3P0C7X3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.44■■□□□ 1.02
CCNYL3P0C7X3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNYL3P0C7X3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNYL3P0C7X3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.44■■□□□ 1.02
CCNYL3P0C7X3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNYL3P0C7X3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.44■■□□□ 1.02
CCNYL3P0C7X3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CCNYL3P0C7X3 CA15P2-201ENST00000611168 834 ntBASIC21.44■■□□□ 1.02
CCNYL3P0C7X3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.44■■□□□ 1.02
CCNYL3P0C7X3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNYL3P0C7X3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNYL3P0C7X3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CCNYL3P0C7X3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CCNYL3P0C7X3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CCNYL3P0C7X3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
CCNYL3P0C7X3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCNYL3P0C7X3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNYL3P0C7X3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CCNYL3P0C7X3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCNYL3P0C7X3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCNYL3P0C7X3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNYL3P0C7X3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNYL3P0C7X3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.43■■□□□ 1.02
CCNYL3P0C7X3 AC008764.7-201ENST00000593779 1081 ntBASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms