Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.48■■□□□ 1.83
HMGB1P09429 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
HMGB1P09429 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
HMGB1P09429 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC26.47■■□□□ 1.83
HMGB1P09429 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC26.47■■□□□ 1.83
HMGB1P09429 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC26.47■■□□□ 1.83
HMGB1P09429 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC26.47■■□□□ 1.83
HMGB1P09429 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
HMGB1P09429 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
HMGB1P09429 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
HMGB1P09429 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
HMGB1P09429 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
HMGB1P09429 LINC01529-204ENST00000636474 1715 ntBASIC26.46■■□□□ 1.83
HMGB1P09429 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.46■■□□□ 1.83
HMGB1P09429 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
HMGB1P09429 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC26.46■■□□□ 1.83
HMGB1P09429 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
HMGB1P09429 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
HMGB1P09429 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
HMGB1P09429 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.46■■□□□ 1.83
HMGB1P09429 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
HMGB1P09429 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
HMGB1P09429 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.83
HMGB1P09429 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.45■■□□□ 1.82
HMGB1P09429 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
HMGB1P09429 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.45■■□□□ 1.82
HMGB1P09429 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.45■■□□□ 1.82
HMGB1P09429 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
HMGB1P09429 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC26.45■■□□□ 1.82
HMGB1P09429 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
HMGB1P09429 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
HMGB1P09429 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
HMGB1P09429 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.44■■□□□ 1.82
HMGB1P09429 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.44■■□□□ 1.82
HMGB1P09429 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.44■■□□□ 1.82
HMGB1P09429 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
HMGB1P09429 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
HMGB1P09429 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC26.43■■□□□ 1.82
HMGB1P09429 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
HMGB1P09429 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC26.43■■□□□ 1.82
HMGB1P09429 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
HMGB1P09429 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
HMGB1P09429 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
HMGB1P09429 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
HMGB1P09429 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.43■■□□□ 1.82
HMGB1P09429 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
HMGB1P09429 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC26.43■■□□□ 1.82
HMGB1P09429 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
HMGB1P09429 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
HMGB1P09429 AC133561.1-201ENST00000568600 2415 ntBASIC26.43■■□□□ 1.82
HMGB1P09429 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC26.42■■□□□ 1.82
HMGB1P09429 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
HMGB1P09429 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
HMGB1P09429 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.42■■□□□ 1.82
HMGB1P09429 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.42■■□□□ 1.82
HMGB1P09429 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.42■■□□□ 1.82
HMGB1P09429 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.42■■□□□ 1.82
HMGB1P09429 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
HMGB1P09429 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC26.41■■□□□ 1.82
HMGB1P09429 ASB1-202ENST00000409297 878 ntTSL 5 BASIC26.41■■□□□ 1.82
HMGB1P09429 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
HMGB1P09429 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
HMGB1P09429 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
HMGB1P09429 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
HMGB1P09429 C17orf82-201ENST00000623772 1530 ntBASIC26.4■■□□□ 1.82
HMGB1P09429 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
HMGB1P09429 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
HMGB1P09429 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
HMGB1P09429 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
HMGB1P09429 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.4■■□□□ 1.82
HMGB1P09429 DUX4L4-201ENST00000566884 1269 ntBASIC26.4■■□□□ 1.82
HMGB1P09429 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
HMGB1P09429 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
HMGB1P09429 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
HMGB1P09429 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.39■■□□□ 1.82
HMGB1P09429 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
HMGB1P09429 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
HMGB1P09429 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.39■■□□□ 1.82
HMGB1P09429 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.39■■□□□ 1.82
HMGB1P09429 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
HMGB1P09429 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
HMGB1P09429 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC26.39■■□□□ 1.81
HMGB1P09429 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
HMGB1P09429 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
HMGB1P09429 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
HMGB1P09429 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC26.38■■□□□ 1.81
HMGB1P09429 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
HMGB1P09429 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
HMGB1P09429 NKILA-201ENST00000613231 537 ntTSL 4 BASIC26.38■■□□□ 1.81
HMGB1P09429 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.38■■□□□ 1.81
HMGB1P09429 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
HMGB1P09429 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
HMGB1P09429 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
HMGB1P09429 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
HMGB1P09429 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.37■■□□□ 1.81
HMGB1P09429 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.37■■□□□ 1.81
HMGB1P09429 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.37■■□□□ 1.81
HMGB1P09429 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.37■■□□□ 1.81
HMGB1P09429 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
HMGB1P09429 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms