Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TCRAP04437 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRAP04437 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
TCRAP04437 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TCRAP04437 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRAP04437 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TCRAP04437 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRAP04437 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRAP04437 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRAP04437 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TCRAP04437 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.03■□□□□ 0.32
TCRAP04437 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.03■□□□□ 0.32
TCRAP04437 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRAP04437 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TCRAP04437 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.03■□□□□ 0.32
TCRAP04437 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRAP04437 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC17.03■□□□□ 0.32
TCRAP04437 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.03■□□□□ 0.32
TCRAP04437 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRAP04437 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC17.03■□□□□ 0.32
TCRAP04437 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TCRAP04437 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRAP04437 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TCRAP04437 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
TCRAP04437 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TCRAP04437 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.02■□□□□ 0.32
TCRAP04437 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.02■□□□□ 0.32
TCRAP04437 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TCRAP04437 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRAP04437 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
TCRAP04437 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
TCRAP04437 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRAP04437 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TCRAP04437 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.02■□□□□ 0.32
TCRAP04437 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TCRAP04437 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.02■□□□□ 0.32
TCRAP04437 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TCRAP04437 AC079630.1-202ENST00000618127 1840 ntBASIC17.02■□□□□ 0.31
TCRAP04437 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
TCRAP04437 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRAP04437 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TCRAP04437 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRAP04437 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRAP04437 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.01■□□□□ 0.31
TCRAP04437 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TCRAP04437 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TCRAP04437 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.01■□□□□ 0.31
TCRAP04437 AC011551.1-201ENST00000614101 683 ntBASIC17.01■□□□□ 0.31
TCRAP04437 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
TCRAP04437 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.01■□□□□ 0.31
TCRAP04437 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRAP04437 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.01■□□□□ 0.31
TCRAP04437 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.01■□□□□ 0.31
TCRAP04437 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TCRAP04437 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TCRAP04437 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRAP04437 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRAP04437 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TCRAP04437 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.01■□□□□ 0.31
TCRAP04437 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TCRAP04437 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TCRAP04437 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
TCRAP04437 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
TCRAP04437 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
TCRAP04437 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17■□□□□ 0.31
TCRAP04437 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRAP04437 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TCRAP04437 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TCRAP04437 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17■□□□□ 0.31
TCRAP04437 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17■□□□□ 0.31
TCRAP04437 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17■□□□□ 0.31
TCRAP04437 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TCRAP04437 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
TCRAP04437 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRAP04437 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TCRAP04437 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRAP04437 AC092053.2-201ENST00000640557 1818 ntBASIC16.99■□□□□ 0.31
TCRAP04437 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRAP04437 SPCS2P3-201ENST00000500401 656 ntBASIC16.99■□□□□ 0.31
TCRAP04437 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.99■□□□□ 0.31
TCRAP04437 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRAP04437 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRAP04437 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.99■□□□□ 0.31
TCRAP04437 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TCRAP04437 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TCRAP04437 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC16.99■□□□□ 0.31
TCRAP04437 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.98■□□□□ 0.31
TCRAP04437 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.98■□□□□ 0.31
TCRAP04437 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TCRAP04437 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRAP04437 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TCRAP04437 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRAP04437 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TCRAP04437 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TCRAP04437 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TCRAP04437 PVT1-219ENST00000523427 938 ntTSL 3 BASIC16.98■□□□□ 0.31
TCRAP04437 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TCRAP04437 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.98■□□□□ 0.31
TCRAP04437 MIR6765-201ENST00000614092 87 ntBASIC16.98■□□□□ 0.31
TCRAP04437 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms