Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AL022069.1-201ENST00000568025 1636 ntBASIC14.24□□□□□ -0.13
APOBP04114 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
APOBP04114 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
APOBP04114 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
APOBP04114 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBP04114 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOBP04114 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
APOBP04114 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC14.24□□□□□ -0.13
APOBP04114 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBP04114 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.24□□□□□ -0.13
APOBP04114 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC14.24□□□□□ -0.13
APOBP04114 AC004854.2-201ENST00000608450 1441 ntBASIC14.24□□□□□ -0.13
APOBP04114 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
APOBP04114 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
APOBP04114 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOBP04114 OR2I1P-207ENST00000453522 948 ntBASIC14.24□□□□□ -0.13
APOBP04114 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.24□□□□□ -0.13
APOBP04114 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.24□□□□□ -0.13
APOBP04114 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC14.24□□□□□ -0.13
APOBP04114 AL050303.2-201ENST00000619798 666 ntBASIC14.24□□□□□ -0.13
APOBP04114 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBP04114 COX20-201ENST00000366528 568 ntTSL 2 BASIC14.23□□□□□ -0.13
APOBP04114 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOBP04114 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC14.23□□□□□ -0.13
APOBP04114 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOBP04114 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBP04114 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOBP04114 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
APOBP04114 BID-214ENST00000617586 542 ntTSL 5 BASIC14.23□□□□□ -0.13
APOBP04114 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOBP04114 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC14.23□□□□□ -0.13
APOBP04114 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBP04114 AC142086.6-201ENST00000621154 1765 ntBASIC14.23□□□□□ -0.13
APOBP04114 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBP04114 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOBP04114 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
APOBP04114 CD37-213ENST00000598095 1598 ntTSL 2 BASIC14.23□□□□□ -0.13
APOBP04114 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC14.23□□□□□ -0.13
APOBP04114 AC006970.2-201ENST00000450065 779 ntBASIC14.22□□□□□ -0.13
APOBP04114 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.22□□□□□ -0.13
APOBP04114 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.22□□□□□ -0.13
APOBP04114 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC14.22□□□□□ -0.13
APOBP04114 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC14.22□□□□□ -0.13
APOBP04114 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
APOBP04114 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
APOBP04114 AC016769.1-201ENST00000409132 1010 ntBASIC14.22□□□□□ -0.13
APOBP04114 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
APOBP04114 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOBP04114 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOBP04114 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
APOBP04114 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOBP04114 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
APOBP04114 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.22□□□□□ -0.13
APOBP04114 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
APOBP04114 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOBP04114 AC137761.2-201ENST00000561729 223 ntBASIC14.21□□□□□ -0.13
APOBP04114 AC145350.3-201ENST00000569033 163 ntBASIC14.21□□□□□ -0.13
APOBP04114 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOBP04114 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
APOBP04114 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
APOBP04114 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
APOBP04114 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.21□□□□□ -0.13
APOBP04114 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
APOBP04114 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
APOBP04114 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC14.21□□□□□ -0.14
APOBP04114 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14.2□□□□□ -0.14
APOBP04114 AC142086.2-201ENST00000569753 217 ntBASIC14.2□□□□□ -0.14
APOBP04114 AC011767.1-201ENST00000617410 1153 ntBASIC14.2□□□□□ -0.14
APOBP04114 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
APOBP04114 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOBP04114 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC14.2□□□□□ -0.14
APOBP04114 AC010525.1-201ENST00000585559 441 ntBASIC14.2□□□□□ -0.14
APOBP04114 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
APOBP04114 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC14.2□□□□□ -0.14
APOBP04114 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOBP04114 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
APOBP04114 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC14.2□□□□□ -0.14
APOBP04114 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOBP04114 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOBP04114 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC14.2□□□□□ -0.14
APOBP04114 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOBP04114 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC14.2□□□□□ -0.14
APOBP04114 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOBP04114 MIR6089-201ENST00000616698 64 ntBASIC14.2□□□□□ -0.14
APOBP04114 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOBP04114 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOBP04114 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
APOBP04114 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
APOBP04114 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOBP04114 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC14.19□□□□□ -0.14
APOBP04114 TFG-210ENST00000620299 1289 ntTSL 5 BASIC14.19□□□□□ -0.14
APOBP04114 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC14.19□□□□□ -0.14
APOBP04114 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOBP04114 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOBP04114 GPX1P1-201ENST00000388829 606 ntBASIC14.19□□□□□ -0.14
APOBP04114 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC14.19□□□□□ -0.14
APOBP04114 SLC7A5P2-201ENST00000553010 536 ntBASIC14.19□□□□□ -0.14
APOBP04114 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
APOBP04114 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOBP04114 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms