Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.05■□□□□ 0.8
HLA-DQA2P01906 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HLA-DQA2P01906 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.05■□□□□ 0.8
HLA-DQA2P01906 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQA2P01906 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.04■□□□□ 0.8
HLA-DQA2P01906 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQA2P01906 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
HLA-DQA2P01906 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQA2P01906 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
HLA-DQA2P01906 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.04■□□□□ 0.8
HLA-DQA2P01906 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.04■□□□□ 0.8
HLA-DQA2P01906 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.04■□□□□ 0.8
HLA-DQA2P01906 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQA2P01906 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.04■□□□□ 0.8
HLA-DQA2P01906 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
HLA-DQA2P01906 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQA2P01906 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQA2P01906 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-DQA2P01906 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DQA2P01906 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DQA2P01906 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DQA2P01906 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DQA2P01906 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.03■□□□□ 0.8
HLA-DQA2P01906 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DQA2P01906 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DQA2P01906 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HLA-DQA2P01906 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-DQA2P01906 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQA2P01906 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQA2P01906 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQA2P01906 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQA2P01906 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
HLA-DQA2P01906 AC103834.1-201ENST00000520383 144 ntBASIC20.02■□□□□ 0.8
HLA-DQA2P01906 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQA2P01906 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQA2P01906 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.02■□□□□ 0.8
HLA-DQA2P01906 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-DQA2P01906 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
HLA-DQA2P01906 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
HLA-DQA2P01906 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
HLA-DQA2P01906 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HLA-DQA2P01906 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HLA-DQA2P01906 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HLA-DQA2P01906 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
HLA-DQA2P01906 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DQA2P01906 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DQA2P01906 AC103724.3-201ENST00000564481 992 ntBASIC20.01■□□□□ 0.79
HLA-DQA2P01906 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
HLA-DQA2P01906 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.01■□□□□ 0.79
HLA-DQA2P01906 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
HLA-DQA2P01906 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DQA2P01906 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DQA2P01906 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
HLA-DQA2P01906 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-DQA2P01906 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-DQA2P01906 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-DQA2P01906 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DQA2P01906 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
HLA-DQA2P01906 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-DQA2P01906 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
HLA-DQA2P01906 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.99■□□□□ 0.79
HLA-DQA2P01906 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DQA2P01906 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DQA2P01906 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.99■□□□□ 0.79
HLA-DQA2P01906 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-DQA2P01906 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HLA-DQA2P01906 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.99■□□□□ 0.79
HLA-DQA2P01906 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
HLA-DQA2P01906 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DQA2P01906 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DQA2P01906 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
HLA-DQA2P01906 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.98■□□□□ 0.79
HLA-DQA2P01906 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.98■□□□□ 0.79
HLA-DQA2P01906 AL031848.2-201ENST00000607670 837 ntBASIC19.98■□□□□ 0.79
HLA-DQA2P01906 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DQA2P01906 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.98■□□□□ 0.79
HLA-DQA2P01906 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DQA2P01906 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.98■□□□□ 0.79
HLA-DQA2P01906 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DQA2P01906 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DQA2P01906 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DQA2P01906 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DQA2P01906 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HLA-DQA2P01906 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQA2P01906 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQA2P01906 C1orf229-201ENST00000623686 2258 ntBASIC19.97■□□□□ 0.79
HLA-DQA2P01906 AC233723.2-201ENST00000623798 2106 ntBASIC19.97■□□□□ 0.79
HLA-DQA2P01906 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQA2P01906 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQA2P01906 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.97■□□□□ 0.79
HLA-DQA2P01906 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.97■□□□□ 0.79
HLA-DQA2P01906 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQA2P01906 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQA2P01906 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
HLA-DQA2P01906 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQA2P01906 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQA2P01906 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQA2P01906 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.97■□□□□ 0.79
HLA-DQA2P01906 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HLA-DQA2P01906 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms