Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LTAP01374 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LTAP01374 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LTAP01374 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LTAP01374 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LTAP01374 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LTAP01374 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LTAP01374 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LTAP01374 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LTAP01374 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LTAP01374 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LTAP01374 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LTAP01374 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.89■□□□□ 0.29
LTAP01374 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
LTAP01374 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC16.89■□□□□ 0.29
LTAP01374 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LTAP01374 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LTAP01374 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LTAP01374 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LTAP01374 AC131274.2-201ENST00000580697 1507 ntBASIC16.89■□□□□ 0.29
LTAP01374 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LTAP01374 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LTAP01374 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LTAP01374 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.89■□□□□ 0.29
LTAP01374 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LTAP01374 AC079630.1-202ENST00000618127 1840 ntBASIC16.89■□□□□ 0.29
LTAP01374 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LTAP01374 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LTAP01374 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LTAP01374 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LTAP01374 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LTAP01374 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LTAP01374 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LTAP01374 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LTAP01374 CEP120-209ENST00000515110 606 ntTSL 3 BASIC16.88■□□□□ 0.29
LTAP01374 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LTAP01374 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LTAP01374 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
LTAP01374 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LTAP01374 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
LTAP01374 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LTAP01374 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LTAP01374 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LTAP01374 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.87■□□□□ 0.29
LTAP01374 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LTAP01374 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.87■□□□□ 0.29
LTAP01374 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LTAP01374 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LTAP01374 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
LTAP01374 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC16.87■□□□□ 0.29
LTAP01374 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LTAP01374 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
LTAP01374 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LTAP01374 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LTAP01374 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.87■□□□□ 0.29
LTAP01374 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
LTAP01374 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LTAP01374 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC16.86■□□□□ 0.29
LTAP01374 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LTAP01374 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LTAP01374 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LTAP01374 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LTAP01374 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LTAP01374 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LTAP01374 HES4-202ENST00000428771 1040 ntTSL 2 BASIC16.86■□□□□ 0.29
LTAP01374 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LTAP01374 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LTAP01374 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LTAP01374 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
LTAP01374 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.86■□□□□ 0.29
LTAP01374 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.86■□□□□ 0.29
LTAP01374 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
LTAP01374 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC16.85■□□□□ 0.29
LTAP01374 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LTAP01374 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LTAP01374 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.85■□□□□ 0.29
LTAP01374 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LTAP01374 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LTAP01374 AC009831.1-201ENST00000580420 1582 ntBASIC16.85■□□□□ 0.29
LTAP01374 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.85■□□□□ 0.29
LTAP01374 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC16.85■□□□□ 0.29
LTAP01374 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LTAP01374 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LTAP01374 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC16.84■□□□□ 0.29
LTAP01374 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LTAP01374 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.84■□□□□ 0.29
LTAP01374 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LTAP01374 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.84■□□□□ 0.29
LTAP01374 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LTAP01374 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LTAP01374 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC16.84■□□□□ 0.29
LTAP01374 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LTAP01374 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC16.84■□□□□ 0.29
LTAP01374 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LTAP01374 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LTAP01374 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LTAP01374 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LTAP01374 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LTAP01374 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LTAP01374 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms