Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.61■■□□□ 1.37
RTN3O95197 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RTN3O95197 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RTN3O95197 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.6■■□□□ 1.37
RTN3O95197 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RTN3O95197 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.6■■□□□ 1.37
RTN3O95197 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RTN3O95197 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RTN3O95197 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RTN3O95197 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.6■■□□□ 1.37
RTN3O95197 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.6■■□□□ 1.37
RTN3O95197 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.6■■□□□ 1.37
RTN3O95197 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
RTN3O95197 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RTN3O95197 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.6■■□□□ 1.37
RTN3O95197 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
RTN3O95197 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.59■■□□□ 1.37
RTN3O95197 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.59■■□□□ 1.37
RTN3O95197 FP325331.1-202ENST00000623531 1380 ntBASIC23.59■■□□□ 1.37
RTN3O95197 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RTN3O95197 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
RTN3O95197 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RTN3O95197 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
RTN3O95197 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
RTN3O95197 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
RTN3O95197 CLDN5-201ENST00000403084 2357 ntBASIC23.58■■□□□ 1.37
RTN3O95197 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
RTN3O95197 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.58■■□□□ 1.37
RTN3O95197 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.58■■□□□ 1.37
RTN3O95197 AC142381.2-201ENST00000566120 298 ntBASIC23.58■■□□□ 1.37
RTN3O95197 MIR3181-201ENST00000578512 73 ntBASIC23.58■■□□□ 1.37
RTN3O95197 MIR4767-201ENST00000582827 78 ntBASIC23.58■■□□□ 1.37
RTN3O95197 AL031432.3-201ENST00000607698 485 ntBASIC23.58■■□□□ 1.37
RTN3O95197 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.58■■□□□ 1.37
RTN3O95197 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.57■■□□□ 1.36
RTN3O95197 SUDS3P1-201ENST00000505831 966 ntBASIC23.57■■□□□ 1.36
RTN3O95197 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.57■■□□□ 1.36
RTN3O95197 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.57■■□□□ 1.36
RTN3O95197 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
RTN3O95197 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
RTN3O95197 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RTN3O95197 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RTN3O95197 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
RTN3O95197 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.56■■□□□ 1.36
RTN3O95197 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.56■■□□□ 1.36
RTN3O95197 AC136469.2-201ENST00000623944 1028 ntBASIC23.56■■□□□ 1.36
RTN3O95197 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.56■■□□□ 1.36
RTN3O95197 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RTN3O95197 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
RTN3O95197 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
RTN3O95197 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
RTN3O95197 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RTN3O95197 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
RTN3O95197 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
RTN3O95197 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
RTN3O95197 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RTN3O95197 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.55■■□□□ 1.36
RTN3O95197 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RTN3O95197 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.55■■□□□ 1.36
RTN3O95197 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.55■■□□□ 1.36
RTN3O95197 pRNA.6-201ENST00000610482 90 ntBASIC23.55■■□□□ 1.36
RTN3O95197 pRNA.5-201ENST00000612139 90 ntBASIC23.55■■□□□ 1.36
RTN3O95197 pRNA.11-201ENST00000618423 90 ntBASIC23.55■■□□□ 1.36
RTN3O95197 pRNA.13-201ENST00000619112 90 ntBASIC23.55■■□□□ 1.36
RTN3O95197 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.55■■□□□ 1.36
RTN3O95197 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
RTN3O95197 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
RTN3O95197 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.54■■□□□ 1.36
RTN3O95197 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.54■■□□□ 1.36
RTN3O95197 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RTN3O95197 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
RTN3O95197 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RTN3O95197 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RTN3O95197 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RTN3O95197 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RTN3O95197 AC144652.1-201ENST00000609974 1624 ntBASIC23.54■■□□□ 1.36
RTN3O95197 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.54■■□□□ 1.36
RTN3O95197 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.54■■□□□ 1.36
RTN3O95197 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RTN3O95197 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RTN3O95197 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.53■■□□□ 1.36
RTN3O95197 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RTN3O95197 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
RTN3O95197 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RTN3O95197 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.53■■□□□ 1.36
RTN3O95197 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.53■■□□□ 1.36
RTN3O95197 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.53■■□□□ 1.36
RTN3O95197 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RTN3O95197 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.53■■□□□ 1.36
RTN3O95197 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
RTN3O95197 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RTN3O95197 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
RTN3O95197 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.52■■□□□ 1.36
RTN3O95197 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RTN3O95197 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.52■■□□□ 1.36
RTN3O95197 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RTN3O95197 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.52■■□□□ 1.36
RTN3O95197 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
RTN3O95197 DUX4L4-201ENST00000566884 1269 ntBASIC23.52■■□□□ 1.36
RTN3O95197 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms