Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
SUPT3HO75486 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
SUPT3HO75486 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
SUPT3HO75486 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.08■■□□□ 1.13
SUPT3HO75486 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SUPT3HO75486 AC079630.1-202ENST00000618127 1840 ntBASIC22.08■■□□□ 1.13
SUPT3HO75486 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.08■■□□□ 1.13
SUPT3HO75486 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SUPT3HO75486 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.08■■□□□ 1.13
SUPT3HO75486 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SUPT3HO75486 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.08■■□□□ 1.13
SUPT3HO75486 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SUPT3HO75486 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
SUPT3HO75486 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.08■■□□□ 1.13
SUPT3HO75486 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.12
SUPT3HO75486 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.08■■□□□ 1.12
SUPT3HO75486 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SUPT3HO75486 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
SUPT3HO75486 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.07■■□□□ 1.12
SUPT3HO75486 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.07■■□□□ 1.12
SUPT3HO75486 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.07■■□□□ 1.12
SUPT3HO75486 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SUPT3HO75486 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.07■■□□□ 1.12
SUPT3HO75486 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.07■■□□□ 1.12
SUPT3HO75486 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.07■■□□□ 1.12
SUPT3HO75486 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.07■■□□□ 1.12
SUPT3HO75486 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.07■■□□□ 1.12
SUPT3HO75486 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SUPT3HO75486 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.07■■□□□ 1.12
SUPT3HO75486 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SUPT3HO75486 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SUPT3HO75486 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SUPT3HO75486 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SUPT3HO75486 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SUPT3HO75486 AC137630.3-201ENST00000607245 391 ntBASIC22.06■■□□□ 1.12
SUPT3HO75486 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
SUPT3HO75486 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.06■■□□□ 1.12
SUPT3HO75486 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.06■■□□□ 1.12
SUPT3HO75486 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SUPT3HO75486 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SUPT3HO75486 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.05■■□□□ 1.12
SUPT3HO75486 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SUPT3HO75486 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.05■■□□□ 1.12
SUPT3HO75486 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.05■■□□□ 1.12
SUPT3HO75486 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SUPT3HO75486 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
SUPT3HO75486 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SUPT3HO75486 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
SUPT3HO75486 C1orf229-201ENST00000623686 2258 ntBASIC22.05■■□□□ 1.12
SUPT3HO75486 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SUPT3HO75486 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SUPT3HO75486 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.05■■□□□ 1.12
SUPT3HO75486 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
SUPT3HO75486 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
SUPT3HO75486 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.04■■□□□ 1.12
SUPT3HO75486 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.04■■□□□ 1.12
SUPT3HO75486 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
SUPT3HO75486 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SUPT3HO75486 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SUPT3HO75486 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SUPT3HO75486 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.04■■□□□ 1.12
SUPT3HO75486 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.04■■□□□ 1.12
SUPT3HO75486 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.04■■□□□ 1.12
SUPT3HO75486 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.04■■□□□ 1.12
SUPT3HO75486 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
SUPT3HO75486 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SUPT3HO75486 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SUPT3HO75486 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
SUPT3HO75486 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.03■■□□□ 1.12
SUPT3HO75486 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.03■■□□□ 1.12
SUPT3HO75486 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
SUPT3HO75486 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SUPT3HO75486 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
SUPT3HO75486 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.03■■□□□ 1.12
SUPT3HO75486 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SUPT3HO75486 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.03■■□□□ 1.12
SUPT3HO75486 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SUPT3HO75486 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SUPT3HO75486 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SUPT3HO75486 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SUPT3HO75486 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.03■■□□□ 1.12
SUPT3HO75486 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SUPT3HO75486 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
SUPT3HO75486 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SUPT3HO75486 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SUPT3HO75486 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SUPT3HO75486 AC233723.2-201ENST00000623798 2106 ntBASIC22.02■■□□□ 1.12
SUPT3HO75486 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SUPT3HO75486 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SUPT3HO75486 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SUPT3HO75486 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.11
SUPT3HO75486 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.02■■□□□ 1.11
SUPT3HO75486 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
SUPT3HO75486 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SUPT3HO75486 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
SUPT3HO75486 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
SUPT3HO75486 AL024507.2-201ENST00000606070 2574 ntBASIC22.01■■□□□ 1.11
SUPT3HO75486 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22■■□□□ 1.11
SUPT3HO75486 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SUPT3HO75486 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms