Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
USH2AO75445 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
USH2AO75445 METTL15-202ENST00000403099 795 ntTSL 5 BASIC10.18□□□□□ -0.78
USH2AO75445 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC10.18□□□□□ -0.78
USH2AO75445 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
USH2AO75445 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
USH2AO75445 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
USH2AO75445 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
USH2AO75445 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
USH2AO75445 MFSD11-216ENST00000590393 1141 ntBASIC10.18□□□□□ -0.78
USH2AO75445 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
USH2AO75445 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC10.18□□□□□ -0.78
USH2AO75445 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC10.18□□□□□ -0.78
USH2AO75445 AC005181.1-201ENST00000604782 1256 ntBASIC10.18□□□□□ -0.78
USH2AO75445 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
USH2AO75445 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
USH2AO75445 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
USH2AO75445 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
USH2AO75445 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
USH2AO75445 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
USH2AO75445 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
USH2AO75445 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
USH2AO75445 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
USH2AO75445 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
USH2AO75445 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC10.17□□□□□ -0.78
USH2AO75445 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC10.17□□□□□ -0.78
USH2AO75445 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
USH2AO75445 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
USH2AO75445 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
USH2AO75445 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC10.17□□□□□ -0.78
USH2AO75445 LINC02228-203ENST00000641970 1355 ntBASIC10.17□□□□□ -0.78
USH2AO75445 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC10.17□□□□□ -0.78
USH2AO75445 OAS3-207ENST00000551007 998 ntTSL 2 BASIC10.17□□□□□ -0.78
USH2AO75445 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC10.17□□□□□ -0.78
USH2AO75445 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
USH2AO75445 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
USH2AO75445 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
USH2AO75445 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC10.17□□□□□ -0.78
USH2AO75445 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
USH2AO75445 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
USH2AO75445 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
USH2AO75445 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
USH2AO75445 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
USH2AO75445 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
USH2AO75445 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC10.16□□□□□ -0.78
USH2AO75445 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC10.16□□□□□ -0.78
USH2AO75445 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC10.16□□□□□ -0.78
USH2AO75445 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC10.16□□□□□ -0.78
USH2AO75445 AC211429.1-201ENST00000415277 523 ntBASIC10.16□□□□□ -0.78
USH2AO75445 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC10.16□□□□□ -0.78
USH2AO75445 SLC7A5P1-201ENST00000568957 537 ntBASIC10.16□□□□□ -0.78
USH2AO75445 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
USH2AO75445 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
USH2AO75445 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC10.16□□□□□ -0.78
USH2AO75445 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC10.16□□□□□ -0.78
USH2AO75445 AC105233.4-201ENST00000642045 216 ntBASIC10.16□□□□□ -0.78
USH2AO75445 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
USH2AO75445 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
USH2AO75445 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
USH2AO75445 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
USH2AO75445 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
USH2AO75445 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
USH2AO75445 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC10.16□□□□□ -0.78
USH2AO75445 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
USH2AO75445 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
USH2AO75445 SLC29A4P1-201ENST00000398760 971 ntBASIC10.15□□□□□ -0.78
USH2AO75445 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
USH2AO75445 SPI1-203ENST00000533030 661 ntTSL 2 BASIC10.15□□□□□ -0.78
USH2AO75445 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC10.15□□□□□ -0.78
USH2AO75445 AL121832.2-201ENST00000610979 668 ntBASIC10.15□□□□□ -0.78
USH2AO75445 AC010331.1-201ENST00000611423 582 ntBASIC10.15□□□□□ -0.78
USH2AO75445 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
USH2AO75445 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
USH2AO75445 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
USH2AO75445 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
USH2AO75445 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC10.15□□□□□ -0.78
USH2AO75445 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
USH2AO75445 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC10.15□□□□□ -0.78
USH2AO75445 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
USH2AO75445 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
USH2AO75445 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
USH2AO75445 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
USH2AO75445 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
USH2AO75445 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
USH2AO75445 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
USH2AO75445 ITM2C-210ENST00000620962 501 ntBASIC10.15□□□□□ -0.79
USH2AO75445 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC10.15□□□□□ -0.79
USH2AO75445 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
USH2AO75445 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
USH2AO75445 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC10.14□□□□□ -0.79
USH2AO75445 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
USH2AO75445 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
USH2AO75445 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
USH2AO75445 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC10.14□□□□□ -0.79
USH2AO75445 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC10.14□□□□□ -0.79
USH2AO75445 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
USH2AO75445 AP004609.3-201ENST00000610705 1884 ntBASIC10.14□□□□□ -0.79
USH2AO75445 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
USH2AO75445 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
USH2AO75445 MARS-234ENST00000630571 216 ntTSL 5 BASIC10.14□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms