Protein–RNA interactions for Protein: O60906

SMPD2, Sphingomyelin phosphodiesterase 2, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2O60906 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMPD2O60906 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SMPD2O60906 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMPD2O60906 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMPD2O60906 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMPD2O60906 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.57■□□□□ 0.72
SMPD2O60906 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMPD2O60906 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.57■□□□□ 0.72
SMPD2O60906 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMPD2O60906 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMPD2O60906 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SMPD2O60906 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMPD2O60906 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMPD2O60906 AC097381.1-201ENST00000429019 1296 ntBASIC19.56■□□□□ 0.72
SMPD2O60906 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.56■□□□□ 0.72
SMPD2O60906 CA15P2-201ENST00000611168 834 ntBASIC19.56■□□□□ 0.72
SMPD2O60906 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMPD2O60906 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.56■□□□□ 0.72
SMPD2O60906 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.56■□□□□ 0.72
SMPD2O60906 RASA4CP-201ENST00000424092 1398 ntBASIC19.56■□□□□ 0.72
SMPD2O60906 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SMPD2O60906 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMPD2O60906 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SMPD2O60906 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SMPD2O60906 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
SMPD2O60906 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SMPD2O60906 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMPD2O60906 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMPD2O60906 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SMPD2O60906 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMPD2O60906 AC027682.1-201ENST00000562846 899 ntBASIC19.55■□□□□ 0.72
SMPD2O60906 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SMPD2O60906 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMPD2O60906 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMPD2O60906 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMPD2O60906 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMPD2O60906 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
SMPD2O60906 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.54■□□□□ 0.72
SMPD2O60906 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.54■□□□□ 0.72
SMPD2O60906 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.54■□□□□ 0.72
SMPD2O60906 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMPD2O60906 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMPD2O60906 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMPD2O60906 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMPD2O60906 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMPD2O60906 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMPD2O60906 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
SMPD2O60906 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.53■□□□□ 0.72
SMPD2O60906 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SMPD2O60906 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SMPD2O60906 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMPD2O60906 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMPD2O60906 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMPD2O60906 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMPD2O60906 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMPD2O60906 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMPD2O60906 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMPD2O60906 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.52■□□□□ 0.72
SMPD2O60906 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMPD2O60906 SERBP1P1-201ENST00000396021 1160 ntBASIC19.52■□□□□ 0.72
SMPD2O60906 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMPD2O60906 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMPD2O60906 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.52■□□□□ 0.72
SMPD2O60906 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMPD2O60906 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.52■□□□□ 0.72
SMPD2O60906 AC087623.3-201ENST00000607047 1098 ntBASIC19.52■□□□□ 0.72
SMPD2O60906 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.52■□□□□ 0.71
SMPD2O60906 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SMPD2O60906 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
SMPD2O60906 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMPD2O60906 AC008764.7-201ENST00000593779 1081 ntBASIC19.51■□□□□ 0.71
SMPD2O60906 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.51■□□□□ 0.71
SMPD2O60906 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMPD2O60906 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMPD2O60906 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD2O60906 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.5■□□□□ 0.71
SMPD2O60906 IRS3P-201ENST00000223076 1006 ntBASIC19.5■□□□□ 0.71
SMPD2O60906 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD2O60906 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.5■□□□□ 0.71
SMPD2O60906 AL162430.1-201ENST00000480705 870 ntBASIC19.5■□□□□ 0.71
SMPD2O60906 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.5■□□□□ 0.71
SMPD2O60906 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.5■□□□□ 0.71
SMPD2O60906 AC099791.2-201ENST00000605725 427 ntBASIC19.5■□□□□ 0.71
SMPD2O60906 AL138724.1-201ENST00000606771 1088 ntBASIC19.5■□□□□ 0.71
SMPD2O60906 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.5■□□□□ 0.71
SMPD2O60906 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.5■□□□□ 0.71
SMPD2O60906 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SMPD2O60906 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD2O60906 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SMPD2O60906 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMPD2O60906 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SMPD2O60906 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMPD2O60906 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMPD2O60906 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMPD2O60906 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMPD2O60906 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMPD2O60906 AC011298.3-201ENST00000615796 283 ntBASIC19.49■□□□□ 0.71
SMPD2O60906 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SMPD2O60906 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.48■□□□□ 0.71
SMPD2O60906 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms