Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 AL138724.1-201ENST00000606771 1088 ntBASIC23.11■■□□□ 1.29
TSPAN3O60637 AC011298.3-201ENST00000615796 283 ntBASIC23.11■■□□□ 1.29
TSPAN3O60637 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
TSPAN3O60637 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TSPAN3O60637 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
TSPAN3O60637 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.1■■□□□ 1.29
TSPAN3O60637 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TSPAN3O60637 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.1■■□□□ 1.29
TSPAN3O60637 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
TSPAN3O60637 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TSPAN3O60637 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TSPAN3O60637 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TSPAN3O60637 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TSPAN3O60637 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.09■■□□□ 1.29
TSPAN3O60637 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TSPAN3O60637 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
TSPAN3O60637 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
TSPAN3O60637 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
TSPAN3O60637 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
TSPAN3O60637 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TSPAN3O60637 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TSPAN3O60637 AL136967.2-201ENST00000623968 743 ntBASIC23.08■■□□□ 1.29
TSPAN3O60637 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
TSPAN3O60637 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TSPAN3O60637 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.08■■□□□ 1.29
TSPAN3O60637 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
TSPAN3O60637 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
TSPAN3O60637 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TSPAN3O60637 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TSPAN3O60637 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TSPAN3O60637 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TSPAN3O60637 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.28
TSPAN3O60637 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TSPAN3O60637 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
TSPAN3O60637 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TSPAN3O60637 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.07■■□□□ 1.28
TSPAN3O60637 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.07■■□□□ 1.28
TSPAN3O60637 AP001330.3-201ENST00000520123 633 ntBASIC23.07■■□□□ 1.28
TSPAN3O60637 AC008764.7-201ENST00000593779 1081 ntBASIC23.07■■□□□ 1.28
TSPAN3O60637 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.07■■□□□ 1.28
TSPAN3O60637 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
TSPAN3O60637 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.07■■□□□ 1.28
TSPAN3O60637 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.07■■□□□ 1.28
TSPAN3O60637 AC144652.1-201ENST00000609974 1624 ntBASIC23.07■■□□□ 1.28
TSPAN3O60637 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TSPAN3O60637 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
TSPAN3O60637 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TSPAN3O60637 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TSPAN3O60637 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.06■■□□□ 1.28
TSPAN3O60637 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
TSPAN3O60637 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TSPAN3O60637 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
TSPAN3O60637 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.06■■□□□ 1.28
TSPAN3O60637 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.06■■□□□ 1.28
TSPAN3O60637 AC136469.2-201ENST00000623944 1028 ntBASIC23.06■■□□□ 1.28
TSPAN3O60637 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
TSPAN3O60637 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TSPAN3O60637 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.06■■□□□ 1.28
TSPAN3O60637 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.06■■□□□ 1.28
TSPAN3O60637 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
TSPAN3O60637 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TSPAN3O60637 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TSPAN3O60637 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TSPAN3O60637 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TSPAN3O60637 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TSPAN3O60637 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
TSPAN3O60637 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TSPAN3O60637 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.05■■□□□ 1.28
TSPAN3O60637 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.05■■□□□ 1.28
TSPAN3O60637 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TSPAN3O60637 AC079630.1-202ENST00000618127 1840 ntBASIC23.05■■□□□ 1.28
TSPAN3O60637 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TSPAN3O60637 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.04■■□□□ 1.28
TSPAN3O60637 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TSPAN3O60637 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
TSPAN3O60637 MIR939-201ENST00000401314 82 ntBASIC23.04■■□□□ 1.28
TSPAN3O60637 ZNRF2P3-201ENST00000424200 374 ntBASIC23.04■■□□□ 1.28
TSPAN3O60637 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.04■■□□□ 1.28
TSPAN3O60637 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.04■■□□□ 1.28
TSPAN3O60637 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TSPAN3O60637 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
TSPAN3O60637 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
TSPAN3O60637 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TSPAN3O60637 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
TSPAN3O60637 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.03■■□□□ 1.28
TSPAN3O60637 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.03■■□□□ 1.28
TSPAN3O60637 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.03■■□□□ 1.28
TSPAN3O60637 FP325331.1-202ENST00000623531 1380 ntBASIC23.03■■□□□ 1.28
TSPAN3O60637 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TSPAN3O60637 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
TSPAN3O60637 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TSPAN3O60637 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
TSPAN3O60637 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.03■■□□□ 1.28
TSPAN3O60637 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
TSPAN3O60637 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TSPAN3O60637 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.03■■□□□ 1.28
TSPAN3O60637 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
TSPAN3O60637 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.03■■□□□ 1.28
TSPAN3O60637 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.03■■□□□ 1.28
TSPAN3O60637 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms