Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 LINC01529-204ENST00000636474 1715 ntBASIC20.25■□□□□ 0.83
ZIC3O60481 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZIC3O60481 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ZIC3O60481 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.25■□□□□ 0.83
ZIC3O60481 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ZIC3O60481 AC024257.2-201ENST00000549699 147 ntBASIC20.25■□□□□ 0.83
ZIC3O60481 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
ZIC3O60481 DUX4L4-201ENST00000566884 1269 ntBASIC20.25■□□□□ 0.83
ZIC3O60481 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZIC3O60481 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.25■□□□□ 0.83
ZIC3O60481 AC135279.3-201ENST00000610945 1311 ntBASIC20.25■□□□□ 0.83
ZIC3O60481 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.24■□□□□ 0.83
ZIC3O60481 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.24■□□□□ 0.83
ZIC3O60481 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZIC3O60481 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZIC3O60481 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
ZIC3O60481 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZIC3O60481 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZIC3O60481 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZIC3O60481 MIR638-201ENST00000385237 100 ntBASIC20.24■□□□□ 0.83
ZIC3O60481 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.24■□□□□ 0.83
ZIC3O60481 AC133561.4-201ENST00000566112 224 ntBASIC20.24■□□□□ 0.83
ZIC3O60481 AL138724.1-201ENST00000606771 1088 ntBASIC20.24■□□□□ 0.83
ZIC3O60481 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.24■□□□□ 0.83
ZIC3O60481 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZIC3O60481 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.24■□□□□ 0.83
ZIC3O60481 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.23■□□□□ 0.83
ZIC3O60481 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.23■□□□□ 0.83
ZIC3O60481 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ZIC3O60481 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZIC3O60481 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZIC3O60481 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ZIC3O60481 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.23■□□□□ 0.83
ZIC3O60481 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.23■□□□□ 0.83
ZIC3O60481 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.23■□□□□ 0.83
ZIC3O60481 pRNA.6-201ENST00000610482 90 ntBASIC20.23■□□□□ 0.83
ZIC3O60481 pRNA.5-201ENST00000612139 90 ntBASIC20.23■□□□□ 0.83
ZIC3O60481 pRNA.11-201ENST00000618423 90 ntBASIC20.23■□□□□ 0.83
ZIC3O60481 pRNA.13-201ENST00000619112 90 ntBASIC20.23■□□□□ 0.83
ZIC3O60481 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZIC3O60481 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.23■□□□□ 0.83
ZIC3O60481 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.22■□□□□ 0.83
ZIC3O60481 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZIC3O60481 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZIC3O60481 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZIC3O60481 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZIC3O60481 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.22■□□□□ 0.83
ZIC3O60481 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.22■□□□□ 0.83
ZIC3O60481 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.22■□□□□ 0.83
ZIC3O60481 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
ZIC3O60481 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
ZIC3O60481 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
ZIC3O60481 ANOS2P-203ENST00000472227 1816 ntBASIC20.22■□□□□ 0.83
ZIC3O60481 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZIC3O60481 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZIC3O60481 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ZIC3O60481 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
ZIC3O60481 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.21■□□□□ 0.83
ZIC3O60481 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZIC3O60481 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
ZIC3O60481 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
ZIC3O60481 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.21■□□□□ 0.83
ZIC3O60481 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZIC3O60481 AC011298.3-201ENST00000615796 283 ntBASIC20.21■□□□□ 0.83
ZIC3O60481 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZIC3O60481 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZIC3O60481 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZIC3O60481 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZIC3O60481 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZIC3O60481 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.2■□□□□ 0.82
ZIC3O60481 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.2■□□□□ 0.82
ZIC3O60481 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.2■□□□□ 0.82
ZIC3O60481 AL499627.2-201ENST00000606283 725 ntBASIC20.2■□□□□ 0.82
ZIC3O60481 AC005837.3-201ENST00000612163 286 ntBASIC20.2■□□□□ 0.82
ZIC3O60481 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZIC3O60481 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZIC3O60481 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.2■□□□□ 0.82
ZIC3O60481 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZIC3O60481 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.19■□□□□ 0.82
ZIC3O60481 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.19■□□□□ 0.82
ZIC3O60481 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZIC3O60481 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.19■□□□□ 0.82
ZIC3O60481 AL353803.4-201ENST00000565882 1934 ntBASIC20.19■□□□□ 0.82
ZIC3O60481 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.19■□□□□ 0.82
ZIC3O60481 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZIC3O60481 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZIC3O60481 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.18■□□□□ 0.82
ZIC3O60481 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.18■□□□□ 0.82
ZIC3O60481 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.18■□□□□ 0.82
ZIC3O60481 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.18■□□□□ 0.82
ZIC3O60481 MIR4767-201ENST00000582827 78 ntBASIC20.18■□□□□ 0.82
ZIC3O60481 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZIC3O60481 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.18■□□□□ 0.82
ZIC3O60481 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
ZIC3O60481 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ZIC3O60481 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZIC3O60481 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.17■□□□□ 0.82
ZIC3O60481 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.17■□□□□ 0.82
ZIC3O60481 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZIC3O60481 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms