Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
URB1O60287 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
URB1O60287 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.2■□□□□ 0.98
URB1O60287 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
URB1O60287 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
URB1O60287 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.2■□□□□ 0.98
URB1O60287 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
URB1O60287 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.2■□□□□ 0.98
URB1O60287 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.2■□□□□ 0.98
URB1O60287 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
URB1O60287 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.19■□□□□ 0.98
URB1O60287 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.19■□□□□ 0.98
URB1O60287 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
URB1O60287 GPX1P1-201ENST00000388829 606 ntBASIC21.19■□□□□ 0.98
URB1O60287 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.19■□□□□ 0.98
URB1O60287 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.19■□□□□ 0.98
URB1O60287 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
URB1O60287 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.19■□□□□ 0.98
URB1O60287 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.19■□□□□ 0.98
URB1O60287 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
URB1O60287 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
URB1O60287 AL022069.1-201ENST00000568025 1636 ntBASIC21.19■□□□□ 0.98
URB1O60287 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
URB1O60287 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.18■□□□□ 0.98
URB1O60287 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.18■□□□□ 0.98
URB1O60287 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
URB1O60287 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.18■□□□□ 0.98
URB1O60287 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
URB1O60287 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
URB1O60287 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
URB1O60287 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
URB1O60287 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.18■□□□□ 0.98
URB1O60287 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
URB1O60287 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.17■□□□□ 0.98
URB1O60287 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.17■□□□□ 0.98
URB1O60287 AP005435.1-201ENST00000529293 1178 ntBASIC21.17■□□□□ 0.98
URB1O60287 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.17■□□□□ 0.98
URB1O60287 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.17■□□□□ 0.98
URB1O60287 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.17■□□□□ 0.98
URB1O60287 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.17■□□□□ 0.98
URB1O60287 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.17■□□□□ 0.98
URB1O60287 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
URB1O60287 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
URB1O60287 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
URB1O60287 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.16■□□□□ 0.98
URB1O60287 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
URB1O60287 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
URB1O60287 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
URB1O60287 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.16■□□□□ 0.98
URB1O60287 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.16■□□□□ 0.98
URB1O60287 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.16■□□□□ 0.98
URB1O60287 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
URB1O60287 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
URB1O60287 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
URB1O60287 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.16■□□□□ 0.98
URB1O60287 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.15■□□□□ 0.98
URB1O60287 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
URB1O60287 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
URB1O60287 BID-214ENST00000617586 542 ntTSL 5 BASIC21.15■□□□□ 0.98
URB1O60287 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
URB1O60287 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
URB1O60287 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
URB1O60287 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
URB1O60287 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.14■□□□□ 0.98
URB1O60287 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.14■□□□□ 0.98
URB1O60287 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
URB1O60287 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
URB1O60287 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
URB1O60287 MIR663A-201ENST00000385250 93 ntBASIC21.14■□□□□ 0.97
URB1O60287 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.14■□□□□ 0.97
URB1O60287 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.14■□□□□ 0.97
URB1O60287 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
URB1O60287 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
URB1O60287 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
URB1O60287 LINC02228-203ENST00000641970 1355 ntBASIC21.14■□□□□ 0.97
URB1O60287 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.13■□□□□ 0.97
URB1O60287 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
URB1O60287 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.13■□□□□ 0.97
URB1O60287 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.13■□□□□ 0.97
URB1O60287 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
URB1O60287 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
URB1O60287 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.13■□□□□ 0.97
URB1O60287 AL499627.2-201ENST00000606283 725 ntBASIC21.13■□□□□ 0.97
URB1O60287 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
URB1O60287 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
URB1O60287 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
URB1O60287 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.12■□□□□ 0.97
URB1O60287 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.12■□□□□ 0.97
URB1O60287 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.12■□□□□ 0.97
URB1O60287 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
URB1O60287 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.12■□□□□ 0.97
URB1O60287 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
URB1O60287 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.12■□□□□ 0.97
URB1O60287 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
URB1O60287 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
URB1O60287 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
URB1O60287 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
URB1O60287 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.11■□□□□ 0.97
URB1O60287 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.11■□□□□ 0.97
URB1O60287 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms