Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSNA1O43805 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SSNA1O43805 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SSNA1O43805 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SSNA1O43805 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SSNA1O43805 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.07■□□□□ 0.64
SSNA1O43805 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSNA1O43805 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSNA1O43805 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSNA1O43805 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSNA1O43805 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSNA1O43805 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSNA1O43805 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSNA1O43805 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSNA1O43805 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSNA1O43805 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.06■□□□□ 0.64
SSNA1O43805 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.06■□□□□ 0.64
SSNA1O43805 AC138932.1-201ENST00000534164 6830 ntBASIC19.06■□□□□ 0.64
SSNA1O43805 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSNA1O43805 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSNA1O43805 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.06■□□□□ 0.64
SSNA1O43805 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.06■□□□□ 0.64
SSNA1O43805 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.06■□□□□ 0.64
SSNA1O43805 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.06■□□□□ 0.64
SSNA1O43805 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSNA1O43805 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSNA1O43805 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.06■□□□□ 0.64
SSNA1O43805 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSNA1O43805 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSNA1O43805 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SSNA1O43805 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SSNA1O43805 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SSNA1O43805 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SSNA1O43805 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSNA1O43805 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SSNA1O43805 AC092053.2-201ENST00000640557 1818 ntBASIC19.05■□□□□ 0.64
SSNA1O43805 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SSNA1O43805 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSNA1O43805 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSNA1O43805 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
SSNA1O43805 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SSNA1O43805 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
SSNA1O43805 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SSNA1O43805 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.04■□□□□ 0.64
SSNA1O43805 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.04■□□□□ 0.64
SSNA1O43805 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSNA1O43805 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SSNA1O43805 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSNA1O43805 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSNA1O43805 AC092667.1-201ENST00000434301 2586 ntBASIC19.04■□□□□ 0.64
SSNA1O43805 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSNA1O43805 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSNA1O43805 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.04■□□□□ 0.64
SSNA1O43805 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SSNA1O43805 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.03■□□□□ 0.64
SSNA1O43805 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.03■□□□□ 0.64
SSNA1O43805 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
SSNA1O43805 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SSNA1O43805 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SSNA1O43805 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
SSNA1O43805 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSNA1O43805 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSNA1O43805 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.03■□□□□ 0.64
SSNA1O43805 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSNA1O43805 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSNA1O43805 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.03■□□□□ 0.64
SSNA1O43805 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.03■□□□□ 0.64
SSNA1O43805 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSNA1O43805 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.03■□□□□ 0.64
SSNA1O43805 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSNA1O43805 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSNA1O43805 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.03■□□□□ 0.64
SSNA1O43805 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SSNA1O43805 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SSNA1O43805 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSNA1O43805 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SSNA1O43805 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSNA1O43805 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SSNA1O43805 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SSNA1O43805 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.02■□□□□ 0.64
SSNA1O43805 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SSNA1O43805 DUX4L28-201ENST00000623687 678 ntBASIC19.02■□□□□ 0.64
SSNA1O43805 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSNA1O43805 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SSNA1O43805 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
SSNA1O43805 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
SSNA1O43805 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.02■□□□□ 0.63
SSNA1O43805 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSNA1O43805 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSNA1O43805 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.01■□□□□ 0.63
SSNA1O43805 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSNA1O43805 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSNA1O43805 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SSNA1O43805 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSNA1O43805 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SSNA1O43805 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.01■□□□□ 0.63
SSNA1O43805 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SSNA1O43805 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SSNA1O43805 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SSNA1O43805 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms