Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.84■■□□□ 1.89
FOXN1O15353 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
FOXN1O15353 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC26.84■■□□□ 1.89
FOXN1O15353 TERF1P2-201ENST00000583350 1212 ntBASIC26.84■■□□□ 1.89
FOXN1O15353 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC26.84■■□□□ 1.89
FOXN1O15353 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.84■■□□□ 1.89
FOXN1O15353 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
FOXN1O15353 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC26.84■■□□□ 1.89
FOXN1O15353 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
FOXN1O15353 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
FOXN1O15353 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
FOXN1O15353 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC26.83■■□□□ 1.89
FOXN1O15353 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC26.83■■□□□ 1.89
FOXN1O15353 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
FOXN1O15353 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC26.83■■□□□ 1.89
FOXN1O15353 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
FOXN1O15353 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
FOXN1O15353 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
FOXN1O15353 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
FOXN1O15353 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.83■■□□□ 1.88
FOXN1O15353 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
FOXN1O15353 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
FOXN1O15353 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
FOXN1O15353 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
FOXN1O15353 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
FOXN1O15353 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
FOXN1O15353 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.82■■□□□ 1.88
FOXN1O15353 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
FOXN1O15353 AC006970.2-201ENST00000450065 779 ntBASIC26.82■■□□□ 1.88
FOXN1O15353 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC26.82■■□□□ 1.88
FOXN1O15353 PARP1-210ENST00000629232 477 ntTSL 5 BASIC26.82■■□□□ 1.88
FOXN1O15353 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC26.82■■□□□ 1.88
FOXN1O15353 AC097639.1-201ENST00000565519 1891 ntBASIC26.82■■□□□ 1.88
FOXN1O15353 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
FOXN1O15353 SLC6A10P-202ENST00000431994 2058 ntBASIC26.81■■□□□ 1.88
FOXN1O15353 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
FOXN1O15353 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
FOXN1O15353 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
FOXN1O15353 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
FOXN1O15353 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC26.81■■□□□ 1.88
FOXN1O15353 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC26.81■■□□□ 1.88
FOXN1O15353 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC26.81■■□□□ 1.88
FOXN1O15353 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
FOXN1O15353 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
FOXN1O15353 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
FOXN1O15353 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
FOXN1O15353 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
FOXN1O15353 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC26.8■■□□□ 1.88
FOXN1O15353 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
FOXN1O15353 AC012414.1-201ENST00000556676 535 ntBASIC26.8■■□□□ 1.88
FOXN1O15353 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.8■■□□□ 1.88
FOXN1O15353 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
FOXN1O15353 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
FOXN1O15353 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
FOXN1O15353 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
FOXN1O15353 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.79■■□□□ 1.88
FOXN1O15353 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
FOXN1O15353 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
FOXN1O15353 AL139125.2-201ENST00000623134 1869 ntBASIC26.79■■□□□ 1.88
FOXN1O15353 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.79■■□□□ 1.88
FOXN1O15353 CROCCP5-201ENST00000436658 830 ntBASIC26.79■■□□□ 1.88
FOXN1O15353 APTR-205ENST00000447009 902 ntTSL 2 BASIC26.79■■□□□ 1.88
FOXN1O15353 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
FOXN1O15353 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.78■■□□□ 1.88
FOXN1O15353 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
FOXN1O15353 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
FOXN1O15353 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
FOXN1O15353 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
FOXN1O15353 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
FOXN1O15353 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
FOXN1O15353 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
FOXN1O15353 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.77■■□□□ 1.88
FOXN1O15353 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC26.77■■□□□ 1.88
FOXN1O15353 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
FOXN1O15353 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
FOXN1O15353 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.77■■□□□ 1.88
FOXN1O15353 NCF1B-203ENST00000435988 1254 ntBASIC26.77■■□□□ 1.88
FOXN1O15353 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC26.77■■□□□ 1.88
FOXN1O15353 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
FOXN1O15353 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
FOXN1O15353 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
FOXN1O15353 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC26.76■■□□□ 1.87
FOXN1O15353 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC26.76■■□□□ 1.87
FOXN1O15353 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
FOXN1O15353 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
FOXN1O15353 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
FOXN1O15353 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC26.75■■□□□ 1.87
FOXN1O15353 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC26.75■■□□□ 1.87
FOXN1O15353 AC016769.1-201ENST00000409132 1010 ntBASIC26.75■■□□□ 1.87
FOXN1O15353 AC006455.2-201ENST00000429931 906 ntBASIC26.75■■□□□ 1.87
FOXN1O15353 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
FOXN1O15353 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
FOXN1O15353 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.75■■□□□ 1.87
FOXN1O15353 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
FOXN1O15353 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
FOXN1O15353 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
FOXN1O15353 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
FOXN1O15353 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
FOXN1O15353 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.74■■□□□ 1.87
FOXN1O15353 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC26.74■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms