Protein–RNA interactions for Protein: O15165

LDLRAD4, Low-density lipoprotein receptor class A domain-containing protein 4, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4O15165 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LDLRAD4O15165 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LDLRAD4O15165 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.16■□□□□ 0.66
LDLRAD4O15165 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LDLRAD4O15165 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.15■□□□□ 0.66
LDLRAD4O15165 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LDLRAD4O15165 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.15■□□□□ 0.66
LDLRAD4O15165 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LDLRAD4O15165 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.15■□□□□ 0.66
LDLRAD4O15165 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
LDLRAD4O15165 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
LDLRAD4O15165 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LDLRAD4O15165 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.15■□□□□ 0.66
LDLRAD4O15165 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LDLRAD4O15165 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.15■□□□□ 0.66
LDLRAD4O15165 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LDLRAD4O15165 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
LDLRAD4O15165 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LDLRAD4O15165 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.14■□□□□ 0.65
LDLRAD4O15165 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.14■□□□□ 0.65
LDLRAD4O15165 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LDLRAD4O15165 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
LDLRAD4O15165 AC019171.1-201ENST00000601251 1056 ntBASIC19.13■□□□□ 0.65
LDLRAD4O15165 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDLRAD4O15165 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LDLRAD4O15165 AC092053.2-201ENST00000640557 1818 ntBASIC19.13■□□□□ 0.65
LDLRAD4O15165 AL353803.4-201ENST00000565882 1934 ntBASIC19.13■□□□□ 0.65
LDLRAD4O15165 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDLRAD4O15165 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LDLRAD4O15165 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.13■□□□□ 0.65
LDLRAD4O15165 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
LDLRAD4O15165 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDLRAD4O15165 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.12■□□□□ 0.65
LDLRAD4O15165 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDLRAD4O15165 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.12■□□□□ 0.65
LDLRAD4O15165 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
LDLRAD4O15165 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDLRAD4O15165 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
LDLRAD4O15165 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDLRAD4O15165 AC022616.5-201ENST00000518796 181 ntBASIC19.12■□□□□ 0.65
LDLRAD4O15165 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.12■□□□□ 0.65
LDLRAD4O15165 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDLRAD4O15165 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LDLRAD4O15165 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDLRAD4O15165 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LDLRAD4O15165 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LDLRAD4O15165 C11orf96-202ENST00000528572 1834 ntBASIC19.11■□□□□ 0.65
LDLRAD4O15165 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.11■□□□□ 0.65
LDLRAD4O15165 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDLRAD4O15165 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDLRAD4O15165 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LDLRAD4O15165 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
LDLRAD4O15165 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.11■□□□□ 0.65
LDLRAD4O15165 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.11■□□□□ 0.65
LDLRAD4O15165 AC129492.7-201ENST00000622992 756 ntBASIC19.11■□□□□ 0.65
LDLRAD4O15165 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.11■□□□□ 0.65
LDLRAD4O15165 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LDLRAD4O15165 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
LDLRAD4O15165 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDLRAD4O15165 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
LDLRAD4O15165 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.1■□□□□ 0.65
LDLRAD4O15165 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LDLRAD4O15165 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDLRAD4O15165 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDLRAD4O15165 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDLRAD4O15165 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.1■□□□□ 0.65
LDLRAD4O15165 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDLRAD4O15165 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.1■□□□□ 0.65
LDLRAD4O15165 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.1■□□□□ 0.65
LDLRAD4O15165 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDLRAD4O15165 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.1■□□□□ 0.65
LDLRAD4O15165 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDLRAD4O15165 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDLRAD4O15165 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDLRAD4O15165 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LDLRAD4O15165 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LDLRAD4O15165 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LDLRAD4O15165 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDLRAD4O15165 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDLRAD4O15165 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDLRAD4O15165 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDLRAD4O15165 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDLRAD4O15165 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDLRAD4O15165 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
LDLRAD4O15165 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.09■□□□□ 0.65
LDLRAD4O15165 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LDLRAD4O15165 AF131216.4-201ENST00000638924 1588 ntBASIC19.09■□□□□ 0.65
LDLRAD4O15165 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LDLRAD4O15165 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LDLRAD4O15165 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.09■□□□□ 0.65
LDLRAD4O15165 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.09■□□□□ 0.65
LDLRAD4O15165 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.08■□□□□ 0.65
LDLRAD4O15165 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LDLRAD4O15165 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.08■□□□□ 0.65
LDLRAD4O15165 AC080038.3-201ENST00000623346 1952 ntBASIC19.08■□□□□ 0.65
LDLRAD4O15165 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LDLRAD4O15165 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LDLRAD4O15165 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LDLRAD4O15165 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.08■□□□□ 0.64
LDLRAD4O15165 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms