Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 AC133637.1-201ENST00000624115 1537 ntBASIC22.72■■□□□ 1.23
NPC1O15118 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NPC1O15118 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NPC1O15118 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
NPC1O15118 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
NPC1O15118 AC135731.1-201ENST00000569415 2548 ntBASIC22.72■■□□□ 1.23
NPC1O15118 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
NPC1O15118 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
NPC1O15118 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.71■■□□□ 1.23
NPC1O15118 JTB-203ENST00000368589 1216 ntTSL 2 BASIC22.71■■□□□ 1.23
NPC1O15118 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.71■■□□□ 1.23
NPC1O15118 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.71■■□□□ 1.23
NPC1O15118 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.71■■□□□ 1.23
NPC1O15118 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.71■■□□□ 1.23
NPC1O15118 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
NPC1O15118 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
NPC1O15118 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
NPC1O15118 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
NPC1O15118 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
NPC1O15118 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
NPC1O15118 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.23
NPC1O15118 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
NPC1O15118 SLC47A1P1-202ENST00000449666 945 ntBASIC22.7■■□□□ 1.22
NPC1O15118 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.7■■□□□ 1.22
NPC1O15118 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NPC1O15118 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
NPC1O15118 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
NPC1O15118 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NPC1O15118 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
NPC1O15118 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.7■■□□□ 1.22
NPC1O15118 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
NPC1O15118 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NPC1O15118 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
NPC1O15118 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
NPC1O15118 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NPC1O15118 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NPC1O15118 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NPC1O15118 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
NPC1O15118 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
NPC1O15118 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.69■■□□□ 1.22
NPC1O15118 AC092666.2-201ENST00000613287 246 ntBASIC22.69■■□□□ 1.22
NPC1O15118 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
NPC1O15118 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
NPC1O15118 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
NPC1O15118 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
NPC1O15118 AC144652.1-201ENST00000609974 1624 ntBASIC22.68■■□□□ 1.22
NPC1O15118 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NPC1O15118 OR2I1P-207ENST00000453522 948 ntBASIC22.68■■□□□ 1.22
NPC1O15118 IGHV3-19-201ENST00000521488 291 ntBASIC22.68■■□□□ 1.22
NPC1O15118 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.68■■□□□ 1.22
NPC1O15118 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.68■■□□□ 1.22
NPC1O15118 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NPC1O15118 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.68■■□□□ 1.22
NPC1O15118 LINC01529-204ENST00000636474 1715 ntBASIC22.68■■□□□ 1.22
NPC1O15118 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.68■■□□□ 1.22
NPC1O15118 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NPC1O15118 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
NPC1O15118 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.67■■□□□ 1.22
NPC1O15118 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NPC1O15118 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.67■■□□□ 1.22
NPC1O15118 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.67■■□□□ 1.22
NPC1O15118 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.67■■□□□ 1.22
NPC1O15118 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC22.67■■□□□ 1.22
NPC1O15118 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.67■■□□□ 1.22
NPC1O15118 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
NPC1O15118 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
NPC1O15118 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NPC1O15118 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NPC1O15118 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
NPC1O15118 TSPY26P-201ENST00000476365 1326 ntBASIC22.66■■□□□ 1.22
NPC1O15118 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.66■■□□□ 1.22
NPC1O15118 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NPC1O15118 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.66■■□□□ 1.22
NPC1O15118 AC087623.3-201ENST00000607047 1098 ntBASIC22.66■■□□□ 1.22
NPC1O15118 AL358852.1-201ENST00000623174 1268 ntBASIC22.66■■□□□ 1.22
NPC1O15118 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
NPC1O15118 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
NPC1O15118 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NPC1O15118 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NPC1O15118 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.65■■□□□ 1.22
NPC1O15118 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.65■■□□□ 1.22
NPC1O15118 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.65■■□□□ 1.22
NPC1O15118 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.65■■□□□ 1.22
NPC1O15118 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NPC1O15118 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NPC1O15118 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NPC1O15118 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NPC1O15118 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.64■■□□□ 1.21
NPC1O15118 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
NPC1O15118 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.64■■□□□ 1.21
NPC1O15118 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
NPC1O15118 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NPC1O15118 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
NPC1O15118 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NPC1O15118 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
NPC1O15118 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
NPC1O15118 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.63■■□□□ 1.21
NPC1O15118 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.63■■□□□ 1.21
NPC1O15118 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
NPC1O15118 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms