Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC31.82■■■□□ 2.68
CHD2O14647 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.68
CHD2O14647 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC31.82■■■□□ 2.68
CHD2O14647 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.68
CHD2O14647 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC31.81■■■□□ 2.68
CHD2O14647 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CHD2O14647 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
CHD2O14647 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC31.81■■■□□ 2.68
CHD2O14647 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC31.81■■■□□ 2.68
CHD2O14647 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC31.81■■■□□ 2.68
CHD2O14647 GAS2L1P2-201ENST00000436355 1356 ntBASIC31.81■■■□□ 2.68
CHD2O14647 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC31.81■■■□□ 2.68
CHD2O14647 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC31.81■■■□□ 2.68
CHD2O14647 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC31.8■■■□□ 2.68
CHD2O14647 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CHD2O14647 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC31.8■■■□□ 2.68
CHD2O14647 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CHD2O14647 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CHD2O14647 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC31.79■■■□□ 2.68
CHD2O14647 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC31.79■■■□□ 2.68
CHD2O14647 HSCB-202ENST00000398941 955 ntTSL 2 BASIC31.79■■■□□ 2.68
CHD2O14647 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC31.79■■■□□ 2.68
CHD2O14647 EI24-204ENST00000527235 1625 ntTSL 5 BASIC31.79■■■□□ 2.68
CHD2O14647 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CHD2O14647 AL161729.1-201ENST00000604104 1402 ntBASIC31.79■■■□□ 2.68
CHD2O14647 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC31.79■■■□□ 2.68
CHD2O14647 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.79■■■□□ 2.68
CHD2O14647 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC31.79■■■□□ 2.68
CHD2O14647 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC31.79■■■□□ 2.68
CHD2O14647 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CHD2O14647 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CHD2O14647 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC31.78■■■□□ 2.68
CHD2O14647 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC31.78■■■□□ 2.68
CHD2O14647 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC31.78■■■□□ 2.68
CHD2O14647 DBI-210ENST00000542275 757 ntTSL 5 BASIC31.78■■■□□ 2.68
CHD2O14647 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC31.78■■■□□ 2.68
CHD2O14647 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CHD2O14647 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC31.77■■■□□ 2.68
CHD2O14647 WWOX-218ENST00000627394 894 ntTSL 5 BASIC31.77■■■□□ 2.68
CHD2O14647 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CHD2O14647 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC31.77■■■□□ 2.68
CHD2O14647 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CHD2O14647 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC31.77■■■□□ 2.68
CHD2O14647 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
CHD2O14647 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC31.77■■■□□ 2.68
CHD2O14647 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CHD2O14647 CROCCP5-201ENST00000436658 830 ntBASIC31.77■■■□□ 2.68
CHD2O14647 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC31.77■■■□□ 2.68
CHD2O14647 GALNS-213ENST00000569433 723 ntTSL 3 BASIC31.77■■■□□ 2.68
CHD2O14647 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC31.77■■■□□ 2.68
CHD2O14647 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC31.76■■■□□ 2.68
CHD2O14647 STX7-201ENST00000367937 1090 ntTSL 5 BASIC31.76■■■□□ 2.67
CHD2O14647 AL355802.2-201ENST00000402069 882 ntBASIC31.76■■■□□ 2.67
CHD2O14647 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC31.76■■■□□ 2.67
CHD2O14647 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.67
CHD2O14647 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC31.75■■■□□ 2.67
CHD2O14647 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC31.75■■■□□ 2.67
CHD2O14647 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
CHD2O14647 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
CHD2O14647 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
CHD2O14647 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CHD2O14647 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC31.75■■■□□ 2.67
CHD2O14647 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CHD2O14647 MAP2K4P1-201ENST00000438453 1195 ntBASIC31.75■■■□□ 2.67
CHD2O14647 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC31.75■■■□□ 2.67
CHD2O14647 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CHD2O14647 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CHD2O14647 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CHD2O14647 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC31.74■■■□□ 2.67
CHD2O14647 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CHD2O14647 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CHD2O14647 MIR663A-201ENST00000385250 93 ntBASIC31.73■■■□□ 2.67
CHD2O14647 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
CHD2O14647 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CHD2O14647 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CHD2O14647 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC31.72■■■□□ 2.67
CHD2O14647 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
CHD2O14647 ALDH1A3-203ENST00000557963 1670 ntBASIC31.72■■■□□ 2.67
CHD2O14647 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC31.72■■■□□ 2.67
CHD2O14647 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CHD2O14647 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CHD2O14647 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC31.71■■■□□ 2.67
CHD2O14647 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
CHD2O14647 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CHD2O14647 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC31.71■■■□□ 2.67
CHD2O14647 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
CHD2O14647 AP004607.4-201ENST00000530158 1459 ntBASIC31.7■■■□□ 2.66
CHD2O14647 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC31.7■■■□□ 2.66
CHD2O14647 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.66
CHD2O14647 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC31.69■■■□□ 2.66
CHD2O14647 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC31.69■■■□□ 2.66
CHD2O14647 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC31.69■■■□□ 2.66
CHD2O14647 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
CHD2O14647 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CHD2O14647 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
CHD2O14647 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC31.69■■■□□ 2.66
CHD2O14647 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CHD2O14647 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CHD2O14647 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
CHD2O14647 AC105233.4-201ENST00000642045 216 ntBASIC31.68■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms