Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CLDN5O00501 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.73■■□□□ 1.39
CLDN5O00501 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.73■■□□□ 1.39
CLDN5O00501 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CLDN5O00501 AC144652.1-201ENST00000609974 1624 ntBASIC23.73■■□□□ 1.39
CLDN5O00501 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CLDN5O00501 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.73■■□□□ 1.39
CLDN5O00501 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLDN5O00501 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CLDN5O00501 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CLDN5O00501 MIR3181-201ENST00000578512 73 ntBASIC23.72■■□□□ 1.39
CLDN5O00501 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CLDN5O00501 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.72■■□□□ 1.39
CLDN5O00501 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLDN5O00501 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLDN5O00501 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLDN5O00501 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CLDN5O00501 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLDN5O00501 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.71■■□□□ 1.39
CLDN5O00501 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.71■■□□□ 1.39
CLDN5O00501 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.71■■□□□ 1.39
CLDN5O00501 pRNA.6-201ENST00000610482 90 ntBASIC23.71■■□□□ 1.39
CLDN5O00501 pRNA.5-201ENST00000612139 90 ntBASIC23.71■■□□□ 1.39
CLDN5O00501 AC005837.3-201ENST00000612163 286 ntBASIC23.71■■□□□ 1.39
CLDN5O00501 pRNA.11-201ENST00000618423 90 ntBASIC23.71■■□□□ 1.39
CLDN5O00501 pRNA.13-201ENST00000619112 90 ntBASIC23.71■■□□□ 1.39
CLDN5O00501 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.71■■□□□ 1.39
CLDN5O00501 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.71■■□□□ 1.39
CLDN5O00501 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
CLDN5O00501 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CLDN5O00501 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
CLDN5O00501 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CLDN5O00501 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.7■■□□□ 1.38
CLDN5O00501 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CLDN5O00501 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.7■■□□□ 1.38
CLDN5O00501 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.69■■□□□ 1.38
CLDN5O00501 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.69■■□□□ 1.38
CLDN5O00501 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.69■■□□□ 1.38
CLDN5O00501 MIR4767-201ENST00000582827 78 ntBASIC23.69■■□□□ 1.38
CLDN5O00501 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CLDN5O00501 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CLDN5O00501 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.69■■□□□ 1.38
CLDN5O00501 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
CLDN5O00501 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.68■■□□□ 1.38
CLDN5O00501 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.68■■□□□ 1.38
CLDN5O00501 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLDN5O00501 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CLDN5O00501 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.68■■□□□ 1.38
CLDN5O00501 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.68■■□□□ 1.38
CLDN5O00501 AL031432.3-201ENST00000607698 485 ntBASIC23.68■■□□□ 1.38
CLDN5O00501 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.68■■□□□ 1.38
CLDN5O00501 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLDN5O00501 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
CLDN5O00501 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLDN5O00501 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.68■■□□□ 1.38
CLDN5O00501 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CLDN5O00501 FP325331.1-202ENST00000623531 1380 ntBASIC23.67■■□□□ 1.38
CLDN5O00501 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.67■■□□□ 1.38
CLDN5O00501 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.67■■□□□ 1.38
CLDN5O00501 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLDN5O00501 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CLDN5O00501 AC019069.1-201ENST00000610008 1333 ntBASIC23.67■■□□□ 1.38
CLDN5O00501 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLDN5O00501 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLDN5O00501 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLDN5O00501 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.67■■□□□ 1.38
CLDN5O00501 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CLDN5O00501 AC133561.4-201ENST00000566112 224 ntBASIC23.67■■□□□ 1.38
CLDN5O00501 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.67■■□□□ 1.38
CLDN5O00501 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.67■■□□□ 1.38
CLDN5O00501 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CLDN5O00501 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
CLDN5O00501 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
CLDN5O00501 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.66■■□□□ 1.38
CLDN5O00501 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.66■■□□□ 1.38
CLDN5O00501 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CLDN5O00501 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLDN5O00501 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLDN5O00501 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CLDN5O00501 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CLDN5O00501 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.66■■□□□ 1.38
CLDN5O00501 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.66■■□□□ 1.38
CLDN5O00501 LINC01529-204ENST00000636474 1715 ntBASIC23.66■■□□□ 1.38
CLDN5O00501 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CLDN5O00501 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLDN5O00501 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CLDN5O00501 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CLDN5O00501 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CLDN5O00501 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.65■■□□□ 1.38
CLDN5O00501 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.65■■□□□ 1.38
CLDN5O00501 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.65■■□□□ 1.38
CLDN5O00501 DUX4L4-201ENST00000566884 1269 ntBASIC23.65■■□□□ 1.38
CLDN5O00501 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.65■■□□□ 1.38
CLDN5O00501 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLDN5O00501 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLDN5O00501 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLDN5O00501 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLDN5O00501 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CLDN5O00501 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
CLDN5O00501 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.64■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms