Protein–RNA interactions for Protein: D6R901

USP17L21, Ubiquitin carboxyl-terminal hydrolase 17-like protein 21, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L21D6R901 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.63■■□□□ 1.85
USP17L21D6R901 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
USP17L21D6R901 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC26.62■■□□□ 1.85
USP17L21D6R901 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
USP17L21D6R901 MIR939-201ENST00000401314 82 ntBASIC26.62■■□□□ 1.85
USP17L21D6R901 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC26.62■■□□□ 1.85
USP17L21D6R901 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.62■■□□□ 1.85
USP17L21D6R901 DUX4L4-201ENST00000566884 1269 ntBASIC26.62■■□□□ 1.85
USP17L21D6R901 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC26.62■■□□□ 1.85
USP17L21D6R901 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC26.62■■□□□ 1.85
USP17L21D6R901 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC26.62■■□□□ 1.85
USP17L21D6R901 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
USP17L21D6R901 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
USP17L21D6R901 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
USP17L21D6R901 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
USP17L21D6R901 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
USP17L21D6R901 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
USP17L21D6R901 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.61■■□□□ 1.85
USP17L21D6R901 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
USP17L21D6R901 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
USP17L21D6R901 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
USP17L21D6R901 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
USP17L21D6R901 LINC01529-204ENST00000636474 1715 ntBASIC26.6■■□□□ 1.85
USP17L21D6R901 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
USP17L21D6R901 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
USP17L21D6R901 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.6■■□□□ 1.85
USP17L21D6R901 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.6■■□□□ 1.85
USP17L21D6R901 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.6■■□□□ 1.85
USP17L21D6R901 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.6■■□□□ 1.85
USP17L21D6R901 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
USP17L21D6R901 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
USP17L21D6R901 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
USP17L21D6R901 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
USP17L21D6R901 AC079630.1-202ENST00000618127 1840 ntBASIC26.6■■□□□ 1.85
USP17L21D6R901 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.6■■□□□ 1.85
USP17L21D6R901 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
USP17L21D6R901 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
USP17L21D6R901 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
USP17L21D6R901 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC26.59■■□□□ 1.85
USP17L21D6R901 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
USP17L21D6R901 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.59■■□□□ 1.85
USP17L21D6R901 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
USP17L21D6R901 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC26.59■■□□□ 1.85
USP17L21D6R901 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
USP17L21D6R901 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
USP17L21D6R901 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
USP17L21D6R901 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC26.58■■□□□ 1.85
USP17L21D6R901 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
USP17L21D6R901 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC26.58■■□□□ 1.85
USP17L21D6R901 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
USP17L21D6R901 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
USP17L21D6R901 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.58■■□□□ 1.85
USP17L21D6R901 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.58■■□□□ 1.85
USP17L21D6R901 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.58■■□□□ 1.85
USP17L21D6R901 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
USP17L21D6R901 AL499627.2-201ENST00000606283 725 ntBASIC26.58■■□□□ 1.85
USP17L21D6R901 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
USP17L21D6R901 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC26.58■■□□□ 1.85
USP17L21D6R901 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
USP17L21D6R901 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
USP17L21D6R901 ZNRF2P3-201ENST00000424200 374 ntBASIC26.57■■□□□ 1.84
USP17L21D6R901 AC008764.7-201ENST00000593779 1081 ntBASIC26.57■■□□□ 1.84
USP17L21D6R901 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.57■■□□□ 1.84
USP17L21D6R901 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
USP17L21D6R901 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
USP17L21D6R901 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.57■■□□□ 1.84
USP17L21D6R901 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
USP17L21D6R901 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC26.57■■□□□ 1.84
USP17L21D6R901 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC26.56■■□□□ 1.84
USP17L21D6R901 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
USP17L21D6R901 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
USP17L21D6R901 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
USP17L21D6R901 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
USP17L21D6R901 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.56■■□□□ 1.84
USP17L21D6R901 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC26.56■■□□□ 1.84
USP17L21D6R901 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
USP17L21D6R901 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
USP17L21D6R901 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC26.55■■□□□ 1.84
USP17L21D6R901 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
USP17L21D6R901 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
USP17L21D6R901 AC091305.1-201ENST00000479476 895 ntBASIC26.55■■□□□ 1.84
USP17L21D6R901 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
USP17L21D6R901 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
USP17L21D6R901 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
USP17L21D6R901 AC133637.1-201ENST00000624115 1537 ntBASIC26.55■■□□□ 1.84
USP17L21D6R901 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.54■■□□□ 1.84
USP17L21D6R901 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
USP17L21D6R901 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
USP17L21D6R901 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.54■■□□□ 1.84
USP17L21D6R901 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
USP17L21D6R901 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
USP17L21D6R901 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
USP17L21D6R901 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
USP17L21D6R901 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC26.54■■□□□ 1.84
USP17L21D6R901 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
USP17L21D6R901 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
USP17L21D6R901 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
USP17L21D6R901 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC26.53■■□□□ 1.84
USP17L21D6R901 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
USP17L21D6R901 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms