Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
TRIM6-TRIM34B2RNG4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
TRIM6-TRIM34B2RNG4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC27.39■■□□□ 1.97
TRIM6-TRIM34B2RNG4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC27.39■■□□□ 1.97
TRIM6-TRIM34B2RNG4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TRIM6-TRIM34B2RNG4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TRIM6-TRIM34B2RNG4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
TRIM6-TRIM34B2RNG4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
TRIM6-TRIM34B2RNG4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
TRIM6-TRIM34B2RNG4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
TRIM6-TRIM34B2RNG4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
TRIM6-TRIM34B2RNG4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC27.37■■□□□ 1.97
TRIM6-TRIM34B2RNG4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC27.37■■□□□ 1.97
TRIM6-TRIM34B2RNG4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
TRIM6-TRIM34B2RNG4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
TRIM6-TRIM34B2RNG4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
TRIM6-TRIM34B2RNG4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
TRIM6-TRIM34B2RNG4 MIR6724-1-201ENST00000616420 92 ntBASIC27.36■■□□□ 1.97
TRIM6-TRIM34B2RNG4 MIR6724-2-201ENST00000616483 92 ntBASIC27.36■■□□□ 1.97
TRIM6-TRIM34B2RNG4 MIR6724-4-201ENST00000617390 92 ntBASIC27.36■■□□□ 1.97
TRIM6-TRIM34B2RNG4 MIR6724-3-201ENST00000622482 92 ntBASIC27.36■■□□□ 1.97
TRIM6-TRIM34B2RNG4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
TRIM6-TRIM34B2RNG4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
TRIM6-TRIM34B2RNG4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
TRIM6-TRIM34B2RNG4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
TRIM6-TRIM34B2RNG4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC27.35■■□□□ 1.97
TRIM6-TRIM34B2RNG4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
TRIM6-TRIM34B2RNG4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC27.35■■□□□ 1.97
TRIM6-TRIM34B2RNG4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC27.35■■□□□ 1.97
TRIM6-TRIM34B2RNG4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
TRIM6-TRIM34B2RNG4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC27.35■■□□□ 1.97
TRIM6-TRIM34B2RNG4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
TRIM6-TRIM34B2RNG4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TRIM6-TRIM34B2RNG4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC27.35■■□□□ 1.97
TRIM6-TRIM34B2RNG4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC27.34■■□□□ 1.97
TRIM6-TRIM34B2RNG4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
TRIM6-TRIM34B2RNG4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC27.34■■□□□ 1.97
TRIM6-TRIM34B2RNG4 AL353803.4-201ENST00000565882 1934 ntBASIC27.34■■□□□ 1.97
TRIM6-TRIM34B2RNG4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC27.34■■□□□ 1.97
TRIM6-TRIM34B2RNG4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC27.34■■□□□ 1.97
TRIM6-TRIM34B2RNG4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC27.34■■□□□ 1.97
TRIM6-TRIM34B2RNG4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
TRIM6-TRIM34B2RNG4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
TRIM6-TRIM34B2RNG4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
TRIM6-TRIM34B2RNG4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
TRIM6-TRIM34B2RNG4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC27.33■■□□□ 1.97
TRIM6-TRIM34B2RNG4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
TRIM6-TRIM34B2RNG4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC27.33■■□□□ 1.97
TRIM6-TRIM34B2RNG4 GRAMD4P7-201ENST00000578182 1232 ntBASIC27.33■■□□□ 1.97
TRIM6-TRIM34B2RNG4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
TRIM6-TRIM34B2RNG4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
TRIM6-TRIM34B2RNG4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
TRIM6-TRIM34B2RNG4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
TRIM6-TRIM34B2RNG4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
TRIM6-TRIM34B2RNG4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
TRIM6-TRIM34B2RNG4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TRIM6-TRIM34B2RNG4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TRIM6-TRIM34B2RNG4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TRIM6-TRIM34B2RNG4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC27.32■■□□□ 1.96
TRIM6-TRIM34B2RNG4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC27.32■■□□□ 1.96
TRIM6-TRIM34B2RNG4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC27.32■■□□□ 1.96
TRIM6-TRIM34B2RNG4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC27.32■■□□□ 1.96
TRIM6-TRIM34B2RNG4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC27.32■■□□□ 1.96
TRIM6-TRIM34B2RNG4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC27.32■■□□□ 1.96
TRIM6-TRIM34B2RNG4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TRIM6-TRIM34B2RNG4 AC144652.1-201ENST00000609974 1624 ntBASIC27.31■■□□□ 1.96
TRIM6-TRIM34B2RNG4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC27.31■■□□□ 1.96
TRIM6-TRIM34B2RNG4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC27.31■■□□□ 1.96
TRIM6-TRIM34B2RNG4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC27.31■■□□□ 1.96
TRIM6-TRIM34B2RNG4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
TRIM6-TRIM34B2RNG4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC27.31■■□□□ 1.96
TRIM6-TRIM34B2RNG4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TRIM6-TRIM34B2RNG4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
TRIM6-TRIM34B2RNG4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC27.3■■□□□ 1.96
TRIM6-TRIM34B2RNG4 AC009102.2-201ENST00000606772 1639 ntBASIC27.3■■□□□ 1.96
TRIM6-TRIM34B2RNG4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TRIM6-TRIM34B2RNG4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
TRIM6-TRIM34B2RNG4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC27.29■■□□□ 1.96
TRIM6-TRIM34B2RNG4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TRIM6-TRIM34B2RNG4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TRIM6-TRIM34B2RNG4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TRIM6-TRIM34B2RNG4 AK3-203ENST00000447596 705 ntTSL 2 BASIC27.29■■□□□ 1.96
TRIM6-TRIM34B2RNG4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC27.29■■□□□ 1.96
TRIM6-TRIM34B2RNG4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TRIM6-TRIM34B2RNG4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC27.29■■□□□ 1.96
TRIM6-TRIM34B2RNG4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
TRIM6-TRIM34B2RNG4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TRIM6-TRIM34B2RNG4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC27.28■■□□□ 1.96
TRIM6-TRIM34B2RNG4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TRIM6-TRIM34B2RNG4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TRIM6-TRIM34B2RNG4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TRIM6-TRIM34B2RNG4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TRIM6-TRIM34B2RNG4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TRIM6-TRIM34B2RNG4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC27.28■■□□□ 1.96
TRIM6-TRIM34B2RNG4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TRIM6-TRIM34B2RNG4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TRIM6-TRIM34B2RNG4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC27.28■■□□□ 1.96
TRIM6-TRIM34B2RNG4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
TRIM6-TRIM34B2RNG4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC27.27■■□□□ 1.96
TRIM6-TRIM34B2RNG4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms