Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
SHISA7A6NL88 LINC02228-203ENST00000641970 1355 ntBASIC22.89■■□□□ 1.26
SHISA7A6NL88 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.89■■□□□ 1.26
SHISA7A6NL88 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.89■■□□□ 1.26
SHISA7A6NL88 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
SHISA7A6NL88 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
SHISA7A6NL88 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
SHISA7A6NL88 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
SHISA7A6NL88 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
SHISA7A6NL88 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.89■■□□□ 1.25
SHISA7A6NL88 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.89■■□□□ 1.25
SHISA7A6NL88 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.89■■□□□ 1.25
SHISA7A6NL88 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.89■■□□□ 1.25
SHISA7A6NL88 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
SHISA7A6NL88 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.88■■□□□ 1.25
SHISA7A6NL88 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
SHISA7A6NL88 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.88■■□□□ 1.25
SHISA7A6NL88 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.88■■□□□ 1.25
SHISA7A6NL88 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SHISA7A6NL88 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
SHISA7A6NL88 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.88■■□□□ 1.25
SHISA7A6NL88 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SHISA7A6NL88 OR2I1P-207ENST00000453522 948 ntBASIC22.88■■□□□ 1.25
SHISA7A6NL88 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.88■■□□□ 1.25
SHISA7A6NL88 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.88■■□□□ 1.25
SHISA7A6NL88 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.88■■□□□ 1.25
SHISA7A6NL88 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SHISA7A6NL88 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
SHISA7A6NL88 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SHISA7A6NL88 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SHISA7A6NL88 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SHISA7A6NL88 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.87■■□□□ 1.25
SHISA7A6NL88 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.87■■□□□ 1.25
SHISA7A6NL88 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SHISA7A6NL88 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.87■■□□□ 1.25
SHISA7A6NL88 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SHISA7A6NL88 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SHISA7A6NL88 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
SHISA7A6NL88 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
SHISA7A6NL88 HLA-L-209ENST00000420110 1011 ntBASIC22.87■■□□□ 1.25
SHISA7A6NL88 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.87■■□□□ 1.25
SHISA7A6NL88 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.87■■□□□ 1.25
SHISA7A6NL88 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
SHISA7A6NL88 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SHISA7A6NL88 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
SHISA7A6NL88 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
SHISA7A6NL88 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.86■■□□□ 1.25
SHISA7A6NL88 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.86■■□□□ 1.25
SHISA7A6NL88 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.86■■□□□ 1.25
SHISA7A6NL88 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.86■■□□□ 1.25
SHISA7A6NL88 RAP2CP1-201ENST00000605103 478 ntBASIC22.86■■□□□ 1.25
SHISA7A6NL88 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.86■■□□□ 1.25
SHISA7A6NL88 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.86■■□□□ 1.25
SHISA7A6NL88 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SHISA7A6NL88 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.85■■□□□ 1.25
SHISA7A6NL88 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SHISA7A6NL88 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
SHISA7A6NL88 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.85■■□□□ 1.25
SHISA7A6NL88 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.85■■□□□ 1.25
SHISA7A6NL88 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SHISA7A6NL88 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.85■■□□□ 1.25
SHISA7A6NL88 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.85■■□□□ 1.25
SHISA7A6NL88 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SHISA7A6NL88 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.84■■□□□ 1.25
SHISA7A6NL88 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
SHISA7A6NL88 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SHISA7A6NL88 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SHISA7A6NL88 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
SHISA7A6NL88 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SHISA7A6NL88 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SHISA7A6NL88 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.84■■□□□ 1.25
SHISA7A6NL88 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SHISA7A6NL88 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.84■■□□□ 1.25
SHISA7A6NL88 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
SHISA7A6NL88 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.84■■□□□ 1.25
SHISA7A6NL88 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SHISA7A6NL88 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SHISA7A6NL88 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SHISA7A6NL88 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SHISA7A6NL88 AC145676.1-201ENST00000514988 2004 ntBASIC22.84■■□□□ 1.25
SHISA7A6NL88 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
SHISA7A6NL88 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SHISA7A6NL88 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.83■■□□□ 1.25
SHISA7A6NL88 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.83■■□□□ 1.25
SHISA7A6NL88 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SHISA7A6NL88 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
SHISA7A6NL88 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.83■■□□□ 1.25
SHISA7A6NL88 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
SHISA7A6NL88 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
SHISA7A6NL88 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.83■■□□□ 1.25
SHISA7A6NL88 AC006015.1-201ENST00000429970 570 ntBASIC22.83■■□□□ 1.25
SHISA7A6NL88 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SHISA7A6NL88 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
SHISA7A6NL88 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
SHISA7A6NL88 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.83■■□□□ 1.24
SHISA7A6NL88 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
SHISA7A6NL88 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.82■■□□□ 1.24
SHISA7A6NL88 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.82■■□□□ 1.24
SHISA7A6NL88 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
SHISA7A6NL88 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms