Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
RTL1A6NKG5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
RTL1A6NKG5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
RTL1A6NKG5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
RTL1A6NKG5 NME4-202ENST00000382940 766 ntTSL 3 BASIC30.04■■■□□ 2.4
RTL1A6NKG5 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC30.04■■■□□ 2.4
RTL1A6NKG5 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
RTL1A6NKG5 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC30.04■■■□□ 2.4
RTL1A6NKG5 NME4-211ENST00000620944 1193 ntTSL 2 BASIC30.04■■■□□ 2.4
RTL1A6NKG5 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
RTL1A6NKG5 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC30.04■■■□□ 2.4
RTL1A6NKG5 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
RTL1A6NKG5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
RTL1A6NKG5 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
RTL1A6NKG5 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
RTL1A6NKG5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RTL1A6NKG5 AC010525.1-201ENST00000585559 441 ntBASIC30.03■■■□□ 2.4
RTL1A6NKG5 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
RTL1A6NKG5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RTL1A6NKG5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC30.03■■■□□ 2.4
RTL1A6NKG5 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
RTL1A6NKG5 MED17-227ENST00000640521 2047 ntTSL 5 BASIC30.03■■■□□ 2.4
RTL1A6NKG5 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RTL1A6NKG5 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
RTL1A6NKG5 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RTL1A6NKG5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RTL1A6NKG5 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC30.03■■■□□ 2.4
RTL1A6NKG5 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC30.03■■■□□ 2.4
RTL1A6NKG5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
RTL1A6NKG5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
RTL1A6NKG5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
RTL1A6NKG5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
RTL1A6NKG5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
RTL1A6NKG5 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC30.03■■■□□ 2.4
RTL1A6NKG5 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC30.03■■■□□ 2.4
RTL1A6NKG5 RAB43-208ENST00000615093 783 ntTSL 5 BASIC30.03■■■□□ 2.4
RTL1A6NKG5 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
RTL1A6NKG5 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
RTL1A6NKG5 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC30.02■■■□□ 2.4
RTL1A6NKG5 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
RTL1A6NKG5 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
RTL1A6NKG5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
RTL1A6NKG5 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
RTL1A6NKG5 AC123595.1-201ENST00000440769 1046 ntBASIC30.02■■■□□ 2.4
RTL1A6NKG5 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC30.01■■■□□ 2.4
RTL1A6NKG5 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
RTL1A6NKG5 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
RTL1A6NKG5 AC144652.1-201ENST00000609974 1624 ntBASIC30.01■■■□□ 2.39
RTL1A6NKG5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
RTL1A6NKG5 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.39
RTL1A6NKG5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
RTL1A6NKG5 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
RTL1A6NKG5 DUX4L2-201ENST00000561772 1275 ntBASIC30.01■■■□□ 2.39
RTL1A6NKG5 AL354811.1-201ENST00000610286 706 ntBASIC30.01■■■□□ 2.39
RTL1A6NKG5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC30.01■■■□□ 2.39
RTL1A6NKG5 DUX4L6-201ENST00000626483 1275 ntBASIC30.01■■■□□ 2.39
RTL1A6NKG5 DUX4L1-201ENST00000627662 1275 ntBASIC30.01■■■□□ 2.39
RTL1A6NKG5 DUX4L8-201ENST00000629013 1275 ntBASIC30.01■■■□□ 2.39
RTL1A6NKG5 DUX4L3-201ENST00000630187 1275 ntBASIC30.01■■■□□ 2.39
RTL1A6NKG5 DUX4L7-201ENST00000630678 1275 ntBASIC30.01■■■□□ 2.39
RTL1A6NKG5 DUX4L5-201ENST00000630834 1275 ntBASIC30.01■■■□□ 2.39
RTL1A6NKG5 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
RTL1A6NKG5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC30■■■□□ 2.39
RTL1A6NKG5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC30■■■□□ 2.39
RTL1A6NKG5 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RTL1A6NKG5 KRT18P5-201ENST00000436075 1291 ntBASIC30■■■□□ 2.39
RTL1A6NKG5 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC30■■■□□ 2.39
RTL1A6NKG5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC30■■■□□ 2.39
RTL1A6NKG5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC30■■■□□ 2.39
RTL1A6NKG5 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
RTL1A6NKG5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
RTL1A6NKG5 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC29.99■■■□□ 2.39
RTL1A6NKG5 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
RTL1A6NKG5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
RTL1A6NKG5 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
RTL1A6NKG5 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC29.99■■■□□ 2.39
RTL1A6NKG5 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
RTL1A6NKG5 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC29.99■■■□□ 2.39
RTL1A6NKG5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC29.99■■■□□ 2.39
RTL1A6NKG5 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC29.99■■■□□ 2.39
RTL1A6NKG5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC29.98■■■□□ 2.39
RTL1A6NKG5 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC29.98■■■□□ 2.39
RTL1A6NKG5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
RTL1A6NKG5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC29.98■■■□□ 2.39
RTL1A6NKG5 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
RTL1A6NKG5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC29.98■■■□□ 2.39
RTL1A6NKG5 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
RTL1A6NKG5 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
RTL1A6NKG5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
RTL1A6NKG5 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
RTL1A6NKG5 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
RTL1A6NKG5 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
RTL1A6NKG5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC29.97■■■□□ 2.39
RTL1A6NKG5 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
RTL1A6NKG5 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
RTL1A6NKG5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
RTL1A6NKG5 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC29.97■■■□□ 2.39
RTL1A6NKG5 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC29.96■■■□□ 2.39
RTL1A6NKG5 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC29.96■■■□□ 2.39
RTL1A6NKG5 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC29.96■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms