Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.74■■□□□ 1.07
CNOT1A5YKK6 AC010525.1-201ENST00000585559 441 ntBASIC21.74■■□□□ 1.07
CNOT1A5YKK6 AP004607.4-201ENST00000530158 1459 ntBASIC21.74■■□□□ 1.07
CNOT1A5YKK6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CNOT1A5YKK6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CNOT1A5YKK6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CNOT1A5YKK6 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CNOT1A5YKK6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CNOT1A5YKK6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CNOT1A5YKK6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CNOT1A5YKK6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.73■■□□□ 1.07
CNOT1A5YKK6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CNOT1A5YKK6 MFSD11-216ENST00000590393 1141 ntBASIC21.73■■□□□ 1.07
CNOT1A5YKK6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.73■■□□□ 1.07
CNOT1A5YKK6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.73■■□□□ 1.07
CNOT1A5YKK6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
CNOT1A5YKK6 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNOT1A5YKK6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
CNOT1A5YKK6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CNOT1A5YKK6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.72■■□□□ 1.07
CNOT1A5YKK6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNOT1A5YKK6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.72■■□□□ 1.07
CNOT1A5YKK6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CNOT1A5YKK6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CNOT1A5YKK6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CNOT1A5YKK6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
CNOT1A5YKK6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNOT1A5YKK6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.71■■□□□ 1.07
CNOT1A5YKK6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNOT1A5YKK6 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CNOT1A5YKK6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNOT1A5YKK6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.71■■□□□ 1.07
CNOT1A5YKK6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.71■■□□□ 1.07
CNOT1A5YKK6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CNOT1A5YKK6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
CNOT1A5YKK6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.7■■□□□ 1.07
CNOT1A5YKK6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.7■■□□□ 1.07
CNOT1A5YKK6 AC069152.1-201ENST00000438030 544 ntBASIC21.7■■□□□ 1.07
CNOT1A5YKK6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CNOT1A5YKK6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.07
CNOT1A5YKK6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CNOT1A5YKK6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CNOT1A5YKK6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.69■■□□□ 1.06
CNOT1A5YKK6 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CNOT1A5YKK6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CNOT1A5YKK6 GUSBP6-202ENST00000438529 1198 ntBASIC21.69■■□□□ 1.06
CNOT1A5YKK6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CNOT1A5YKK6 AC133637.1-201ENST00000624115 1537 ntBASIC21.69■■□□□ 1.06
CNOT1A5YKK6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNOT1A5YKK6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CNOT1A5YKK6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNOT1A5YKK6 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CNOT1A5YKK6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNOT1A5YKK6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CNOT1A5YKK6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.68■■□□□ 1.06
CNOT1A5YKK6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNOT1A5YKK6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.68■■□□□ 1.06
CNOT1A5YKK6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CNOT1A5YKK6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.68■■□□□ 1.06
CNOT1A5YKK6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.68■■□□□ 1.06
CNOT1A5YKK6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.68■■□□□ 1.06
CNOT1A5YKK6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.68■■□□□ 1.06
CNOT1A5YKK6 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.68■■□□□ 1.06
CNOT1A5YKK6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.68■■□□□ 1.06
CNOT1A5YKK6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.68■■□□□ 1.06
CNOT1A5YKK6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNOT1A5YKK6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.67■■□□□ 1.06
CNOT1A5YKK6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNOT1A5YKK6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CNOT1A5YKK6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNOT1A5YKK6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CNOT1A5YKK6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNOT1A5YKK6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNOT1A5YKK6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNOT1A5YKK6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CNOT1A5YKK6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.67■■□□□ 1.06
CNOT1A5YKK6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNOT1A5YKK6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.66■■□□□ 1.06
CNOT1A5YKK6 AC141586.4-201ENST00000624558 1573 ntBASIC21.66■■□□□ 1.06
CNOT1A5YKK6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNOT1A5YKK6 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.66■■□□□ 1.06
CNOT1A5YKK6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNOT1A5YKK6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CNOT1A5YKK6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.66■■□□□ 1.06
CNOT1A5YKK6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
CNOT1A5YKK6 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CNOT1A5YKK6 PRORSD1P-201ENST00000295112 541 ntBASIC21.66■■□□□ 1.06
CNOT1A5YKK6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.66■■□□□ 1.06
CNOT1A5YKK6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.66■■□□□ 1.06
CNOT1A5YKK6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.66■■□□□ 1.06
CNOT1A5YKK6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.66■■□□□ 1.06
CNOT1A5YKK6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNOT1A5YKK6 SLC6A10P-202ENST00000431994 2058 ntBASIC21.65■■□□□ 1.06
CNOT1A5YKK6 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNOT1A5YKK6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNOT1A5YKK6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNOT1A5YKK6 AL050303.2-201ENST00000619798 666 ntBASIC21.65■■□□□ 1.06
CNOT1A5YKK6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
CNOT1A5YKK6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNOT1A5YKK6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms