Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-4A0A0B4J246 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-4A0A0B4J246 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRAV8-4A0A0B4J246 AC012354.3-201ENST00000623734 483 ntBASIC15.56■□□□□ 0.08
TRAV8-4A0A0B4J246 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-4A0A0B4J246 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV8-4A0A0B4J246 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-4A0A0B4J246 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-4A0A0B4J246 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-4A0A0B4J246 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
TRAV8-4A0A0B4J246 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-4A0A0B4J246 SHD-204ENST00000599689 1729 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV8-4A0A0B4J246 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-4A0A0B4J246 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
TRAV8-4A0A0B4J246 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV8-4A0A0B4J246 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-4A0A0B4J246 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-4A0A0B4J246 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAV8-4A0A0B4J246 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRAV8-4A0A0B4J246 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
TRAV8-4A0A0B4J246 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-4A0A0B4J246 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-4A0A0B4J246 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV8-4A0A0B4J246 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-4A0A0B4J246 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-4A0A0B4J246 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-4A0A0B4J246 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-4A0A0B4J246 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV8-4A0A0B4J246 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAV8-4A0A0B4J246 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC15.55■□□□□ 0.08
TRAV8-4A0A0B4J246 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRAV8-4A0A0B4J246 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TRAV8-4A0A0B4J246 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAV8-4A0A0B4J246 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-4A0A0B4J246 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAV8-4A0A0B4J246 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV8-4A0A0B4J246 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-4A0A0B4J246 AL022069.1-201ENST00000568025 1636 ntBASIC15.54■□□□□ 0.08
TRAV8-4A0A0B4J246 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-4A0A0B4J246 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-4A0A0B4J246 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRAV8-4A0A0B4J246 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-4A0A0B4J246 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-4A0A0B4J246 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-4A0A0B4J246 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-4A0A0B4J246 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC15.54■□□□□ 0.08
TRAV8-4A0A0B4J246 STK32C-205ENST00000456004 607 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV8-4A0A0B4J246 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAV8-4A0A0B4J246 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV8-4A0A0B4J246 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAV8-4A0A0B4J246 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRAV8-4A0A0B4J246 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRAV8-4A0A0B4J246 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-4A0A0B4J246 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-4A0A0B4J246 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRAV8-4A0A0B4J246 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-4A0A0B4J246 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAV8-4A0A0B4J246 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-4A0A0B4J246 ME2-208ENST00000638937 2471 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV8-4A0A0B4J246 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-4A0A0B4J246 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TRAV8-4A0A0B4J246 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-4A0A0B4J246 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-4A0A0B4J246 GAK-223ENST00000628912 497 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV8-4A0A0B4J246 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TRAV8-4A0A0B4J246 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-4A0A0B4J246 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-4A0A0B4J246 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAV8-4A0A0B4J246 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC15.53■□□□□ 0.08
TRAV8-4A0A0B4J246 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TRAV8-4A0A0B4J246 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-4A0A0B4J246 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV8-4A0A0B4J246 RNF165-205ENST00000588679 2904 ntBASIC15.52■□□□□ 0.08
TRAV8-4A0A0B4J246 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-4A0A0B4J246 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-4A0A0B4J246 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRAV8-4A0A0B4J246 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-4A0A0B4J246 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-4A0A0B4J246 KRT18P24-201ENST00000344739 1156 ntBASIC15.52■□□□□ 0.08
TRAV8-4A0A0B4J246 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRAV8-4A0A0B4J246 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC15.52■□□□□ 0.08
TRAV8-4A0A0B4J246 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC15.52■□□□□ 0.08
TRAV8-4A0A0B4J246 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-4A0A0B4J246 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
TRAV8-4A0A0B4J246 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-4A0A0B4J246 CD37-213ENST00000598095 1598 ntTSL 2 BASIC15.52■□□□□ 0.07
TRAV8-4A0A0B4J246 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-4A0A0B4J246 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-4A0A0B4J246 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC15.52■□□□□ 0.07
TRAV8-4A0A0B4J246 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-4A0A0B4J246 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.07
TRAV8-4A0A0B4J246 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRAV8-4A0A0B4J246 AC004812.2-201ENST00000611079 2094 ntBASIC15.52■□□□□ 0.07
TRAV8-4A0A0B4J246 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-4A0A0B4J246 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-4A0A0B4J246 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-4A0A0B4J246 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRAV8-4A0A0B4J246 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRAV8-4A0A0B4J246 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRAV8-4A0A0B4J246 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms