Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.39■■□□□ 1.01
CCDC187A0A096LP49 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CCDC187A0A096LP49 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC187A0A096LP49 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC187A0A096LP49 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.38■■□□□ 1.01
CCDC187A0A096LP49 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC187A0A096LP49 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.38■■□□□ 1.01
CCDC187A0A096LP49 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.38■■□□□ 1.01
CCDC187A0A096LP49 CCDC92B-201ENST00000575506 885 ntBASIC21.38■■□□□ 1.01
CCDC187A0A096LP49 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.38■■□□□ 1.01
CCDC187A0A096LP49 AL499627.2-201ENST00000606283 725 ntBASIC21.38■■□□□ 1.01
CCDC187A0A096LP49 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC187A0A096LP49 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC187A0A096LP49 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC187A0A096LP49 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC187A0A096LP49 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.37■■□□□ 1.01
CCDC187A0A096LP49 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC187A0A096LP49 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CCDC187A0A096LP49 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.37■■□□□ 1.01
CCDC187A0A096LP49 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.37■■□□□ 1.01
CCDC187A0A096LP49 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.37■■□□□ 1.01
CCDC187A0A096LP49 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC187A0A096LP49 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC187A0A096LP49 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC187A0A096LP49 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC187A0A096LP49 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CCDC187A0A096LP49 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
CCDC187A0A096LP49 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC187A0A096LP49 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CCDC187A0A096LP49 OR2I1P-207ENST00000453522 948 ntBASIC21.36■■□□□ 1.01
CCDC187A0A096LP49 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC187A0A096LP49 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.36■■□□□ 1.01
CCDC187A0A096LP49 AC135731.1-201ENST00000569415 2548 ntBASIC21.35■■□□□ 1.01
CCDC187A0A096LP49 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC187A0A096LP49 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC187A0A096LP49 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC187A0A096LP49 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC187A0A096LP49 AC004911.1-201ENST00000416316 871 ntBASIC21.35■■□□□ 1.01
CCDC187A0A096LP49 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC187A0A096LP49 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC187A0A096LP49 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.35■■□□□ 1.01
CCDC187A0A096LP49 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC187A0A096LP49 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC187A0A096LP49 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC187A0A096LP49 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
CCDC187A0A096LP49 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC187A0A096LP49 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC187A0A096LP49 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC187A0A096LP49 KRT18P14-201ENST00000534205 1250 ntBASIC21.34■■□□□ 1.01
CCDC187A0A096LP49 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC187A0A096LP49 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC187A0A096LP49 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC187A0A096LP49 LINC02228-203ENST00000641970 1355 ntBASIC21.34■■□□□ 1.01
CCDC187A0A096LP49 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CCDC187A0A096LP49 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CCDC187A0A096LP49 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC187A0A096LP49 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.33■■□□□ 1.01
CCDC187A0A096LP49 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC187A0A096LP49 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.33■■□□□ 1.01
CCDC187A0A096LP49 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.33■■□□□ 1.01
CCDC187A0A096LP49 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC187A0A096LP49 NTF6G-201ENST00000591094 616 ntBASIC21.33■■□□□ 1.01
CCDC187A0A096LP49 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC187A0A096LP49 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.33■■□□□ 1
CCDC187A0A096LP49 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
CCDC187A0A096LP49 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC187A0A096LP49 FP325331.1-202ENST00000623531 1380 ntBASIC21.33■■□□□ 1
CCDC187A0A096LP49 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CCDC187A0A096LP49 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC187A0A096LP49 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.32■■□□□ 1
CCDC187A0A096LP49 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC187A0A096LP49 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC187A0A096LP49 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC187A0A096LP49 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.32■■□□□ 1
CCDC187A0A096LP49 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.32■■□□□ 1
CCDC187A0A096LP49 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.32■■□□□ 1
CCDC187A0A096LP49 AC010525.1-201ENST00000585559 441 ntBASIC21.32■■□□□ 1
CCDC187A0A096LP49 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC187A0A096LP49 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.32■■□□□ 1
CCDC187A0A096LP49 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC187A0A096LP49 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
CCDC187A0A096LP49 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC187A0A096LP49 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC187A0A096LP49 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC187A0A096LP49 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC187A0A096LP49 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC187A0A096LP49 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC187A0A096LP49 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC187A0A096LP49 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC187A0A096LP49 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.31■■□□□ 1
CCDC187A0A096LP49 TERF1P2-201ENST00000583350 1212 ntBASIC21.31■■□□□ 1
CCDC187A0A096LP49 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CCDC187A0A096LP49 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC187A0A096LP49 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.31■■□□□ 1
CCDC187A0A096LP49 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.31■■□□□ 1
CCDC187A0A096LP49 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC187A0A096LP49 DUX4L4-201ENST00000566884 1269 ntBASIC21.3■■□□□ 1
CCDC187A0A096LP49 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.3■■□□□ 1
CCDC187A0A096LP49 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.3■■□□□ 1
CCDC187A0A096LP49 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms